git remote update: Fallback to remote if group does not exist
[gitweb.git] / merge-recursive.c
index d4de1adfe271c57ff40f60b4064de9ae35980599..3e1bc3e07f234089656397361b2b83b59bdc19a7 100644 (file)
@@ -3,46 +3,46 @@
  * Fredrik Kuivinen.
  * The thieves were Alex Riesen and Johannes Schindelin, in June/July 2006
  */
-#include <stdarg.h>
-#include <string.h>
-#include <assert.h>
-#include <sys/wait.h>
-#include <sys/types.h>
-#include <sys/stat.h>
-#include <time.h>
 #include "cache.h"
 #include "cache-tree.h"
 #include "commit.h"
 #include "blob.h"
+#include "builtin.h"
 #include "tree-walk.h"
 #include "diff.h"
 #include "diffcore.h"
-#include "run-command.h"
 #include "tag.h"
 #include "unpack-trees.h"
-#include "path-list.h"
+#include "string-list.h"
+#include "xdiff-interface.h"
+#include "ll-merge.h"
+#include "attr.h"
+#include "merge-recursive.h"
+#include "dir.h"
+
+static struct tree *shift_tree_object(struct tree *one, struct tree *two)
+{
+       unsigned char shifted[20];
+
+       /*
+        * NEEDSWORK: this limits the recursion depth to hardcoded
+        * value '2' to avoid excessive overhead.
+        */
+       shift_tree(one->object.sha1, two->object.sha1, shifted, 2);
+       if (!hashcmp(two->object.sha1, shifted))
+               return two;
+       return lookup_tree(shifted);
+}
 
 /*
- * A virtual commit has
- * - (const char *)commit->util set to the name, and
- * - *(int *)commit->object.sha1 set to the virtual id.
+ * A virtual commit has (const char *)commit->util set to the name.
  */
 
-static unsigned commit_list_count(const struct commit_list *l)
-{
-       unsigned c = 0;
-       for (; l; l = l->next )
-               c++;
-       return c;
-}
-
-static struct commit *make_virtual_commit(struct tree *tree, const char *comment)
+struct commit *make_virtual_commit(struct tree *tree, const char *comment)
 {
        struct commit *commit = xcalloc(1, sizeof(struct commit));
-       static unsigned virtual_id = 1;
        commit->tree = tree;
        commit->util = (void*)comment;
-       *(int*)commit->object.sha1 = virtual_id++;
        /* avoid warnings */
        commit->object.parsed = 1;
        return commit;
@@ -56,7 +56,7 @@ static int sha_eq(const unsigned char *a, const unsigned char *b)
 {
        if (!a && !b)
                return 2;
-       return a && b && memcmp(a, b, 20) == 0;
+       return a && b && hashcmp(a, b) == 0;
 }
 
 /*
@@ -73,32 +73,62 @@ struct stage_data
        unsigned processed:1;
 };
 
-static struct path_list current_file_set = {NULL, 0, 0, 1};
-static struct path_list current_directory_set = {NULL, 0, 0, 1};
+static int show(struct merge_options *o, int v)
+{
+       return (!o->call_depth && o->verbosity >= v) || o->verbosity >= 5;
+}
 
-static int output_indent = 0;
+static void flush_output(struct merge_options *o)
+{
+       if (o->obuf.len) {
+               fputs(o->obuf.buf, stdout);
+               strbuf_reset(&o->obuf);
+       }
+}
 
-static void output(const char *fmt, ...)
+static void output(struct merge_options *o, int v, const char *fmt, ...)
 {
-       va_list args;
-       int i;
-       for (i = output_indent; i--;)
-               fputs("  ", stdout);
-       va_start(args, fmt);
-       vfprintf(stdout, fmt, args);
-       va_end(args);
-       fputc('\n', stdout);
+       int len;
+       va_list ap;
+
+       if (!show(o, v))
+               return;
+
+       strbuf_grow(&o->obuf, o->call_depth * 2 + 2);
+       memset(o->obuf.buf + o->obuf.len, ' ', o->call_depth * 2);
+       strbuf_setlen(&o->obuf, o->obuf.len + o->call_depth * 2);
+
+       va_start(ap, fmt);
+       len = vsnprintf(o->obuf.buf + o->obuf.len, strbuf_avail(&o->obuf), fmt, ap);
+       va_end(ap);
+
+       if (len < 0)
+               len = 0;
+       if (len >= strbuf_avail(&o->obuf)) {
+               strbuf_grow(&o->obuf, len + 2);
+               va_start(ap, fmt);
+               len = vsnprintf(o->obuf.buf + o->obuf.len, strbuf_avail(&o->obuf), fmt, ap);
+               va_end(ap);
+               if (len >= strbuf_avail(&o->obuf)) {
+                       die("this should not happen, your snprintf is broken");
+               }
+       }
+       strbuf_setlen(&o->obuf, o->obuf.len + len);
+       strbuf_add(&o->obuf, "\n", 1);
+       if (!o->buffer_output)
+               flush_output(o);
 }
 
-static void output_commit_title(struct commit *commit)
+static void output_commit_title(struct merge_options *o, struct commit *commit)
 {
        int i;
-       for (i = output_indent; i--;)
+       flush_output(o);
+       for (i = o->call_depth; i--;)
                fputs("  ", stdout);
        if (commit->util)
                printf("virtual %s\n", (char *)commit->util);
        else {
-               printf("%s ", sha1_to_hex(commit->object.sha1));
+               printf("%s ", find_unique_abbrev(commit->object.sha1, DEFAULT_ABBREV));
                if (parse_commit(commit) != 0)
                        printf("(bad commit)\n");
                else {
@@ -116,101 +146,20 @@ static void output_commit_title(struct commit *commit)
        }
 }
 
-static const char *current_index_file = NULL;
-static const char *original_index_file;
-static const char *temporary_index_file;
-static int cache_dirty = 0;
-
-static int flush_cache(void)
-{
-       /* flush temporary index */
-       struct lock_file *lock = xcalloc(1, sizeof(struct lock_file));
-       int fd = hold_lock_file_for_update(lock, current_index_file);
-       if (fd < 0)
-               die("could not lock %s", lock->filename);
-       if (write_cache(fd, active_cache, active_nr) ||
-                       close(fd) || commit_lock_file(lock))
-               die ("unable to write %s", current_index_file);
-       discard_cache();
-       cache_dirty = 0;
-       return 0;
-}
-
-static void setup_index(int temp)
-{
-       current_index_file = temp ? temporary_index_file: original_index_file;
-       if (cache_dirty)
-               die("fatal: cache changed flush_cache();");
-       unlink(temporary_index_file);
-       discard_cache();
-}
-
-static struct cache_entry *make_cache_entry(unsigned int mode,
-               const unsigned char *sha1, const char *path, int stage, int refresh)
-{
-       int size, len;
-       struct cache_entry *ce;
-
-       if (!verify_path(path))
-               return NULL;
-
-       len = strlen(path);
-       size = cache_entry_size(len);
-       ce = xcalloc(1, size);
-
-       memcpy(ce->sha1, sha1, 20);
-       memcpy(ce->name, path, len);
-       ce->ce_flags = create_ce_flags(len, stage);
-       ce->ce_mode = create_ce_mode(mode);
-
-       if (refresh)
-               return refresh_cache_entry(ce, 0);
-
-       return ce;
-}
-
 static int add_cacheinfo(unsigned int mode, const unsigned char *sha1,
                const char *path, int stage, int refresh, int options)
 {
        struct cache_entry *ce;
-       if (!cache_dirty)
-               read_cache_from(current_index_file);
-       cache_dirty++;
        ce = make_cache_entry(mode, sha1 ? sha1 : null_sha1, path, stage, refresh);
        if (!ce)
-               return error("cache_addinfo failed: %s", strerror(cache_errno));
+               return error("addinfo_cache failed for path '%s'", path);
        return add_cache_entry(ce, options);
 }
 
-/*
- * This is a global variable which is used in a number of places but
- * only written to in the 'merge' function.
- *
- * index_only == 1    => Don't leave any non-stage 0 entries in the cache and
- *                       don't update the working directory.
- *               0    => Leave unmerged entries in the cache and update
- *                       the working directory.
- */
-static int index_only = 0;
-
-static int git_read_tree(struct tree *tree)
+static void init_tree_desc_from_tree(struct tree_desc *desc, struct tree *tree)
 {
-       int rc;
-       struct object_list *trees = NULL;
-       struct unpack_trees_options opts;
-
-       if (cache_dirty)
-               die("read-tree with dirty cache");
-
-       memset(&opts, 0, sizeof(opts));
-       object_list_append(&tree->object, &trees);
-       rc = unpack_trees(trees, &opts);
-       cache_tree_free(&active_cache_tree);
-
-       if (rc == 0)
-               cache_dirty = 1;
-
-       return rc;
+       parse_tree(tree);
+       init_tree_desc(desc, tree->buffer, tree->size);
 }
 
 static int git_merge_trees(int index_only,
@@ -219,14 +168,9 @@ static int git_merge_trees(int index_only,
                           struct tree *merge)
 {
        int rc;
-       struct object_list *trees = NULL;
+       struct tree_desc t[3];
        struct unpack_trees_options opts;
 
-       if (!cache_dirty) {
-               read_cache_from(current_index_file);
-               cache_dirty = 1;
-       }
-
        memset(&opts, 0, sizeof(opts));
        if (index_only)
                opts.index_only = 1;
@@ -235,86 +179,85 @@ static int git_merge_trees(int index_only,
        opts.merge = 1;
        opts.head_idx = 2;
        opts.fn = threeway_merge;
+       opts.src_index = &the_index;
+       opts.dst_index = &the_index;
 
-       object_list_append(&common->object, &trees);
-       object_list_append(&head->object, &trees);
-       object_list_append(&merge->object, &trees);
+       init_tree_desc_from_tree(t+0, common);
+       init_tree_desc_from_tree(t+1, head);
+       init_tree_desc_from_tree(t+2, merge);
 
-       rc = unpack_trees(trees, &opts);
+       rc = unpack_trees(3, t, &opts);
        cache_tree_free(&active_cache_tree);
-
-       cache_dirty = 1;
-
        return rc;
 }
 
-static struct tree *git_write_tree(void)
+struct tree *write_tree_from_memory(struct merge_options *o)
 {
        struct tree *result = NULL;
 
-       if (cache_dirty) {
-               unsigned i;
+       if (unmerged_cache()) {
+               int i;
+               output(o, 0, "There are unmerged index entries:");
                for (i = 0; i < active_nr; i++) {
                        struct cache_entry *ce = active_cache[i];
                        if (ce_stage(ce))
-                               return NULL;
+                               output(o, 0, "%d %.*s", ce_stage(ce), ce_namelen(ce), ce->name);
                }
-       } else
-               read_cache_from(current_index_file);
+               return NULL;
+       }
 
        if (!active_cache_tree)
                active_cache_tree = cache_tree();
 
        if (!cache_tree_fully_valid(active_cache_tree) &&
-                       cache_tree_update(active_cache_tree,
-                               active_cache, active_nr, 0, 0) < 0)
+           cache_tree_update(active_cache_tree,
+                             active_cache, active_nr, 0, 0) < 0)
                die("error building trees");
 
        result = lookup_tree(active_cache_tree->sha1);
 
-       flush_cache();
-       cache_dirty = 0;
-
        return result;
 }
 
 static int save_files_dirs(const unsigned char *sha1,
                const char *base, int baselen, const char *path,
-               unsigned int mode, int stage)
+               unsigned int mode, int stage, void *context)
 {
        int len = strlen(path);
-       char *newpath = malloc(baselen + len + 1);
+       char *newpath = xmalloc(baselen + len + 1);
+       struct merge_options *o = context;
+
        memcpy(newpath, base, baselen);
        memcpy(newpath + baselen, path, len);
        newpath[baselen + len] = '\0';
 
        if (S_ISDIR(mode))
-               path_list_insert(newpath, &current_directory_set);
+               string_list_insert(newpath, &o->current_directory_set);
        else
-               path_list_insert(newpath, &current_file_set);
+               string_list_insert(newpath, &o->current_file_set);
        free(newpath);
 
-       return READ_TREE_RECURSIVE;
+       return (S_ISDIR(mode) ? READ_TREE_RECURSIVE : 0);
 }
 
-static int get_files_dirs(struct tree *tree)
+static int get_files_dirs(struct merge_options *o, struct tree *tree)
 {
        int n;
-       if (read_tree_recursive(tree, "", 0, 0, NULL, save_files_dirs) != 0)
+       if (read_tree_recursive(tree, "", 0, 0, NULL, save_files_dirs, o))
                return 0;
-       n = current_file_set.nr + current_directory_set.nr;
+       n = o->current_file_set.nr + o->current_directory_set.nr;
        return n;
 }
 
 /*
- * Returns a index_entry instance which doesn't have to correspond to
+ * Returns an index_entry instance which doesn't have to correspond to
  * a real cache entry in Git's index.
  */
 static struct stage_data *insert_stage_data(const char *path,
                struct tree *o, struct tree *a, struct tree *b,
-               struct path_list *entries)
+               struct string_list *entries)
 {
-       struct path_list_item *item;
+       struct string_list_item *item;
        struct stage_data *e = xcalloc(1, sizeof(struct stage_data));
        get_tree_entry(o->object.sha1, path,
                        e->stages[1].sha, &e->stages[1].mode);
@@ -322,7 +265,7 @@ static struct stage_data *insert_stage_data(const char *path,
                        e->stages[2].sha, &e->stages[2].mode);
        get_tree_entry(b->object.sha1, path,
                        e->stages[3].sha, &e->stages[3].mode);
-       item = path_list_insert(path, entries);
+       item = string_list_insert(path, entries);
        item->util = e;
        return e;
 }
@@ -331,31 +274,28 @@ static struct stage_data *insert_stage_data(const char *path,
  * Create a dictionary mapping file names to stage_data objects. The
  * dictionary contains one entry for every path with a non-zero stage entry.
  */
-static struct path_list *get_unmerged(void)
+static struct string_list *get_unmerged(void)
 {
-       struct path_list *unmerged = xcalloc(1, sizeof(struct path_list));
+       struct string_list *unmerged = xcalloc(1, sizeof(struct string_list));
        int i;
 
-       unmerged->strdup_paths = 1;
-       if (!cache_dirty) {
-               read_cache_from(current_index_file);
-               cache_dirty++;
-       }
+       unmerged->strdup_strings = 1;
+
        for (i = 0; i < active_nr; i++) {
-               struct path_list_item *item;
+               struct string_list_item *item;
                struct stage_data *e;
                struct cache_entry *ce = active_cache[i];
                if (!ce_stage(ce))
                        continue;
 
-               item = path_list_lookup(ce->name, unmerged);
+               item = string_list_lookup(ce->name, unmerged);
                if (!item) {
-                       item = path_list_insert(ce->name, unmerged);
+                       item = string_list_insert(ce->name, unmerged);
                        item->util = xcalloc(1, sizeof(struct stage_data));
                }
                e = item->util;
-               e->stages[ce_stage(ce)].mode = ntohl(ce->ce_mode);
-               memcpy(e->stages[ce_stage(ce)].sha, ce->sha1, 20);
+               e->stages[ce_stage(ce)].mode = ce->ce_mode;
+               hashcpy(e->stages[ce_stage(ce)].sha, ce->sha1);
        }
 
        return unmerged;
@@ -370,32 +310,37 @@ struct rename
 };
 
 /*
- * Get information of all renames which occured between 'o_tree' and
+ * Get information of all renames which occurred between 'o_tree' and
  * 'tree'. We need the three trees in the merge ('o_tree', 'a_tree' and
  * 'b_tree') to be able to associate the correct cache entries with
  * the rename information. 'tree' is always equal to either a_tree or b_tree.
  */
-static struct path_list *get_renames(struct tree *tree,
-                                       struct tree *o_tree,
-                                       struct tree *a_tree,
-                                       struct tree *b_tree,
-                                       struct path_list *entries)
+static struct string_list *get_renames(struct merge_options *o,
+                                      struct tree *tree,
+                                      struct tree *o_tree,
+                                      struct tree *a_tree,
+                                      struct tree *b_tree,
+                                      struct string_list *entries)
 {
        int i;
-       struct path_list *renames;
+       struct string_list *renames;
        struct diff_options opts;
 
-       renames = xcalloc(1, sizeof(struct path_list));
+       renames = xcalloc(1, sizeof(struct string_list));
        diff_setup(&opts);
-       opts.recursive = 1;
+       DIFF_OPT_SET(&opts, RECURSIVE);
        opts.detect_rename = DIFF_DETECT_RENAME;
+       opts.rename_limit = o->merge_rename_limit >= 0 ? o->merge_rename_limit :
+                           o->diff_rename_limit >= 0 ? o->diff_rename_limit :
+                           500;
+       opts.warn_on_too_large_rename = 1;
        opts.output_format = DIFF_FORMAT_NO_OUTPUT;
        if (diff_setup_done(&opts) < 0)
                die("diff setup failed");
        diff_tree_sha1(o_tree->object.sha1, tree->object.sha1, "", &opts);
        diffcore_std(&opts);
        for (i = 0; i < diff_queued_diff.nr; ++i) {
-               struct path_list_item *item;
+               struct string_list_item *item;
                struct rename *re;
                struct diff_filepair *pair = diff_queued_diff.queue[i];
                if (pair->status != 'R') {
@@ -405,20 +350,20 @@ static struct path_list *get_renames(struct tree *tree,
                re = xmalloc(sizeof(*re));
                re->processed = 0;
                re->pair = pair;
-               item = path_list_lookup(re->pair->one->path, entries);
+               item = string_list_lookup(re->pair->one->path, entries);
                if (!item)
                        re->src_entry = insert_stage_data(re->pair->one->path,
                                        o_tree, a_tree, b_tree, entries);
                else
                        re->src_entry = item->util;
 
-               item = path_list_lookup(re->pair->two->path, entries);
+               item = string_list_lookup(re->pair->two->path, entries);
                if (!item)
                        re->dst_entry = insert_stage_data(re->pair->two->path,
                                        o_tree, a_tree, b_tree, entries);
                else
                        re->dst_entry = item->util;
-               item = path_list_insert(pair->one->path, renames);
+               item = string_list_insert(pair->one->path, renames);
                item->util = re;
        }
        opts.output_format = DIFF_FORMAT_NO_OUTPUT;
@@ -427,8 +372,9 @@ static struct path_list *get_renames(struct tree *tree,
        return renames;
 }
 
-int update_stages(const char *path, struct diff_filespec *o,
-               struct diff_filespec *a, struct diff_filespec *b, int clear)
+static int update_stages(const char *path, struct diff_filespec *o,
+                        struct diff_filespec *a, struct diff_filespec *b,
+                        int clear)
 {
        int options = ADD_CACHE_OK_TO_ADD | ADD_CACHE_OK_TO_REPLACE;
        if (clear)
@@ -446,51 +392,24 @@ int update_stages(const char *path, struct diff_filespec *o,
        return 0;
 }
 
-static int remove_path(const char *name)
-{
-       int ret, len;
-       char *slash, *dirs;
-
-       ret = unlink(name);
-       if (ret)
-               return ret;
-       len = strlen(name);
-       dirs = malloc(len+1);
-       memcpy(dirs, name, len);
-       dirs[len] = '\0';
-       while ((slash = strrchr(name, '/'))) {
-               *slash = '\0';
-               len = slash - name;
-               if (rmdir(name) != 0)
-                       break;
-       }
-       free(dirs);
-       return ret;
-}
-
-int remove_file(int clean, const char *path)
+static int remove_file(struct merge_options *o, int clean,
+                      const char *path, int no_wd)
 {
-       int update_cache = index_only || clean;
-       int update_working_directory = !index_only;
+       int update_cache = o->call_depth || clean;
+       int update_working_directory = !o->call_depth && !no_wd;
 
        if (update_cache) {
-               if (!cache_dirty)
-                       read_cache_from(current_index_file);
-               cache_dirty++;
                if (remove_file_from_cache(path))
                        return -1;
        }
-       if (update_working_directory)
-       {
-               unlink(path);
-               if (errno != ENOENT || errno != EISDIR)
+       if (update_working_directory) {
+               if (remove_path(path) && errno != ENOENT)
                        return -1;
-               remove_path(path);
        }
        return 0;
 }
 
-static char *unique_path(const char *path, const char *branch)
+static char *unique_path(struct merge_options *o, const char *path, const char *branch)
 {
        char *newpath = xmalloc(strlen(path) + 1 + strlen(branch) + 8 + 1);
        int suffix = 0;
@@ -502,28 +421,19 @@ static char *unique_path(const char *path, const char *branch)
        for (; *p; ++p)
                if ('/' == *p)
                        *p = '_';
-       while (path_list_has_path(&current_file_set, newpath) ||
-              path_list_has_path(&current_directory_set, newpath) ||
+       while (string_list_has_string(&o->current_file_set, newpath) ||
+              string_list_has_string(&o->current_directory_set, newpath) ||
               lstat(newpath, &st) == 0)
                sprintf(p, "_%d", suffix++);
 
-       path_list_insert(newpath, &current_file_set);
+       string_list_insert(newpath, &o->current_file_set);
        return newpath;
 }
 
-static int mkdir_p(const char *path, unsigned long mode)
-{
-       /* path points to cache entries, so strdup before messing with it */
-       char *buf = strdup(path);
-       int result = safe_create_leading_directories(buf);
-       free(buf);
-       return result;
-}
-
 static void flush_buffer(int fd, const char *buf, unsigned long size)
 {
        while (size > 0) {
-               long ret = xwrite(fd, buf, size);
+               long ret = write_in_full(fd, buf, size);
                if (ret < 0) {
                        /* Ignore epipe */
                        if (errno == EPIPE)
@@ -537,31 +447,103 @@ static void flush_buffer(int fd, const char *buf, unsigned long size)
        }
 }
 
-void update_file_flags(const unsigned char *sha,
-                      unsigned mode,
-                      const char *path,
-                      int update_cache,
-                      int update_wd)
+static int would_lose_untracked(const char *path)
 {
-       if (index_only)
+       int pos = cache_name_pos(path, strlen(path));
+
+       if (pos < 0)
+               pos = -1 - pos;
+       while (pos < active_nr &&
+              !strcmp(path, active_cache[pos]->name)) {
+               /*
+                * If stage #0, it is definitely tracked.
+                * If it has stage #2 then it was tracked
+                * before this merge started.  All other
+                * cases the path was not tracked.
+                */
+               switch (ce_stage(active_cache[pos])) {
+               case 0:
+               case 2:
+                       return 0;
+               }
+               pos++;
+       }
+       return file_exists(path);
+}
+
+static int make_room_for_path(const char *path)
+{
+       int status;
+       const char *msg = "failed to create path '%s'%s";
+
+       status = safe_create_leading_directories_const(path);
+       if (status) {
+               if (status == -3) {
+                       /* something else exists */
+                       error(msg, path, ": perhaps a D/F conflict?");
+                       return -1;
+               }
+               die(msg, path, "");
+       }
+
+       /*
+        * Do not unlink a file in the work tree if we are not
+        * tracking it.
+        */
+       if (would_lose_untracked(path))
+               return error("refusing to lose untracked file at '%s'",
+                            path);
+
+       /* Successful unlink is good.. */
+       if (!unlink(path))
+               return 0;
+       /* .. and so is no existing file */
+       if (errno == ENOENT)
+               return 0;
+       /* .. but not some other error (who really cares what?) */
+       return error(msg, path, ": perhaps a D/F conflict?");
+}
+
+static void update_file_flags(struct merge_options *o,
+                             const unsigned char *sha,
+                             unsigned mode,
+                             const char *path,
+                             int update_cache,
+                             int update_wd)
+{
+       if (o->call_depth)
                update_wd = 0;
 
        if (update_wd) {
-               char type[20];
+               enum object_type type;
                void *buf;
                unsigned long size;
 
-               buf = read_sha1_file(sha, type, &size);
+               if (S_ISGITLINK(mode))
+                       die("cannot read object %s '%s': It is a submodule!",
+                           sha1_to_hex(sha), path);
+
+               buf = read_sha1_file(sha, &type, &size);
                if (!buf)
                        die("cannot read object %s '%s'", sha1_to_hex(sha), path);
-               if (strcmp(type, blob_type) != 0)
+               if (type != OBJ_BLOB)
                        die("blob expected for %s '%s'", sha1_to_hex(sha), path);
-
                if (S_ISREG(mode)) {
+                       struct strbuf strbuf = STRBUF_INIT;
+                       if (convert_to_working_tree(path, buf, size, &strbuf)) {
+                               free(buf);
+                               size = strbuf.len;
+                               buf = strbuf_detach(&strbuf, NULL);
+                       }
+               }
+
+               if (make_room_for_path(path) < 0) {
+                       update_wd = 0;
+                       free(buf);
+                       goto update_index;
+               }
+               if (S_ISREG(mode) || (!has_symlinks && S_ISLNK(mode))) {
                        int fd;
-                       if (mkdir_p(path, 0777))
-                               die("failed to create path %s: %s", path, strerror(errno));
-                       unlink(path);
                        if (mode & 0100)
                                mode = 0777;
                        else
@@ -572,26 +554,29 @@ void update_file_flags(const unsigned char *sha,
                        flush_buffer(fd, buf, size);
                        close(fd);
                } else if (S_ISLNK(mode)) {
-                       char *lnk = malloc(size + 1);
-                       memcpy(lnk, buf, size);
-                       lnk[size] = '\0';
-                       mkdir_p(path, 0777);
-                       unlink(lnk);
-                       symlink(lnk, path);
+                       char *lnk = xmemdupz(buf, size);
+                       safe_create_leading_directories_const(path);
+                       unlink(path);
+                       if (symlink(lnk, path))
+                               die("failed to symlink %s: %s", path, strerror(errno));
+                       free(lnk);
                } else
                        die("do not know what to do with %06o %s '%s'",
                            mode, sha1_to_hex(sha), path);
+               free(buf);
        }
+ update_index:
        if (update_cache)
                add_cacheinfo(mode, sha, path, 0, update_wd, ADD_CACHE_OK_TO_ADD);
 }
 
-void update_file(int clean,
-               const unsigned char *sha,
-               unsigned mode,
-               const char *path)
+static void update_file(struct merge_options *o,
+                       int clean,
+                       const unsigned char *sha,
+                       unsigned mode,
+                       const char *path)
 {
-       update_file_flags(sha, mode, path, index_only || clean, !index_only);
+       update_file_flags(o, sha, mode, path, o->call_depth || clean, !o->call_depth);
 }
 
 /* Low level file merging, update and removal */
@@ -604,29 +589,60 @@ struct merge_file_info
                 merge:1;
 };
 
-static char *git_unpack_file(const unsigned char *sha1, char *path)
+static void fill_mm(const unsigned char *sha1, mmfile_t *mm)
 {
-       void *buf;
-       char type[20];
        unsigned long size;
-       int fd;
+       enum object_type type;
+
+       if (!hashcmp(sha1, null_sha1)) {
+               mm->ptr = xstrdup("");
+               mm->size = 0;
+               return;
+       }
 
-       buf = read_sha1_file(sha1, type, &size);
-       if (!buf || strcmp(type, blob_type))
+       mm->ptr = read_sha1_file(sha1, &type, &size);
+       if (!mm->ptr || type != OBJ_BLOB)
                die("unable to read blob object %s", sha1_to_hex(sha1));
+       mm->size = size;
+}
 
-       strcpy(path, ".merge_file_XXXXXX");
-       fd = mkstemp(path);
-       if (fd < 0)
-               die("unable to create temp-file");
-       flush_buffer(fd, buf, size);
-       close(fd);
-       return path;
+static int merge_3way(struct merge_options *o,
+                     mmbuffer_t *result_buf,
+                     struct diff_filespec *one,
+                     struct diff_filespec *a,
+                     struct diff_filespec *b,
+                     const char *branch1,
+                     const char *branch2)
+{
+       mmfile_t orig, src1, src2;
+       char *name1, *name2;
+       int merge_status;
+
+       name1 = xstrdup(mkpath("%s:%s", branch1, a->path));
+       name2 = xstrdup(mkpath("%s:%s", branch2, b->path));
+
+       fill_mm(one->sha1, &orig);
+       fill_mm(a->sha1, &src1);
+       fill_mm(b->sha1, &src2);
+
+       merge_status = ll_merge(result_buf, a->path, &orig,
+                               &src1, name1, &src2, name2,
+                               o->call_depth);
+
+       free(name1);
+       free(name2);
+       free(orig.ptr);
+       free(src1.ptr);
+       free(src2.ptr);
+       return merge_status;
 }
 
-static struct merge_file_info merge_file(struct diff_filespec *o,
-               struct diff_filespec *a, struct diff_filespec *b,
-               const char *branch1, const char *branch2)
+static struct merge_file_info merge_file(struct merge_options *o,
+                                        struct diff_filespec *one,
+                                        struct diff_filespec *a,
+                                        struct diff_filespec *b,
+                                        const char *branch1,
+                                        const char *branch2)
 {
        struct merge_file_info result;
        result.merge = 0;
@@ -636,80 +652,67 @@ static struct merge_file_info merge_file(struct diff_filespec *o,
                result.clean = 0;
                if (S_ISREG(a->mode)) {
                        result.mode = a->mode;
-                       memcpy(result.sha, a->sha1, 20);
+                       hashcpy(result.sha, a->sha1);
                } else {
                        result.mode = b->mode;
-                       memcpy(result.sha, b->sha1, 20);
+                       hashcpy(result.sha, b->sha1);
                }
        } else {
-               if (!sha_eq(a->sha1, o->sha1) && !sha_eq(b->sha1, o->sha1))
+               if (!sha_eq(a->sha1, one->sha1) && !sha_eq(b->sha1, one->sha1))
                        result.merge = 1;
 
-               result.mode = a->mode == o->mode ? b->mode: a->mode;
+               /*
+                * Merge modes
+                */
+               if (a->mode == b->mode || a->mode == one->mode)
+                       result.mode = b->mode;
+               else {
+                       result.mode = a->mode;
+                       if (b->mode != one->mode) {
+                               result.clean = 0;
+                               result.merge = 1;
+                       }
+               }
 
-               if (sha_eq(a->sha1, o->sha1))
-                       memcpy(result.sha, b->sha1, 20);
-               else if (sha_eq(b->sha1, o->sha1))
-                       memcpy(result.sha, a->sha1, 20);
+               if (sha_eq(a->sha1, b->sha1) || sha_eq(a->sha1, one->sha1))
+                       hashcpy(result.sha, b->sha1);
+               else if (sha_eq(b->sha1, one->sha1))
+                       hashcpy(result.sha, a->sha1);
                else if (S_ISREG(a->mode)) {
-                       int code = 1, fd;
-                       struct stat st;
-                       char orig[PATH_MAX];
-                       char src1[PATH_MAX];
-                       char src2[PATH_MAX];
-                       const char *argv[] = {
-                               "merge", "-L", NULL, "-L", NULL, "-L", NULL,
-                               NULL, NULL, NULL,
-                               NULL
-                       };
-                       char *la, *lb, *lo;
-
-                       git_unpack_file(o->sha1, orig);
-                       git_unpack_file(a->sha1, src1);
-                       git_unpack_file(b->sha1, src2);
-
-                       argv[2] = la = strdup(mkpath("%s/%s", branch1, a->path));
-                       argv[6] = lb = strdup(mkpath("%s/%s", branch2, b->path));
-                       argv[4] = lo = strdup(mkpath("orig/%s", o->path));
-                       argv[7] = src1;
-                       argv[8] = orig;
-                       argv[9] = src2,
-
-                       code = run_command_v(10, argv);
-
-                       free(la);
-                       free(lb);
-                       free(lo);
-                       if (code && code < -256) {
-                               die("Failed to execute 'merge'. merge(1) is used as the "
-                                   "file-level merge tool. Is 'merge' in your path?");
-                       }
-                       fd = open(src1, O_RDONLY);
-                       if (fd < 0 || fstat(fd, &st) < 0 ||
-                                       index_fd(result.sha, fd, &st, 1,
-                                               "blob"))
-                               die("Unable to add %s to database", src1);
+                       mmbuffer_t result_buf;
+                       int merge_status;
 
-                       unlink(orig);
-                       unlink(src1);
-                       unlink(src2);
+                       merge_status = merge_3way(o, &result_buf, one, a, b,
+                                                 branch1, branch2);
 
-                       result.clean = WEXITSTATUS(code) == 0;
-               } else {
-                       if (!(S_ISLNK(a->mode) || S_ISLNK(b->mode)))
-                               die("cannot merge modes?");
+                       if ((merge_status < 0) || !result_buf.ptr)
+                               die("Failed to execute internal merge");
 
-                       memcpy(result.sha, a->sha1, 20);
+                       if (write_sha1_file(result_buf.ptr, result_buf.size,
+                                           blob_type, result.sha))
+                               die("Unable to add %s to database",
+                                   a->path);
+
+                       free(result_buf.ptr);
+                       result.clean = (merge_status == 0);
+               } else if (S_ISGITLINK(a->mode)) {
+                       result.clean = 0;
+                       hashcpy(result.sha, a->sha1);
+               } else if (S_ISLNK(a->mode)) {
+                       hashcpy(result.sha, a->sha1);
 
                        if (!sha_eq(a->sha1, b->sha1))
                                result.clean = 0;
+               } else {
+                       die("unsupported object type in the tree");
                }
        }
 
        return result;
 }
 
-static void conflict_rename_rename(struct rename *ren1,
+static void conflict_rename_rename(struct merge_options *o,
+                                  struct rename *ren1,
                                   const char *branch1,
                                   struct rename *ren2,
                                   const char *branch2)
@@ -720,88 +723,97 @@ static void conflict_rename_rename(struct rename *ren1,
        const char *ren2_dst = ren2->pair->two->path;
        const char *dst_name1 = ren1_dst;
        const char *dst_name2 = ren2_dst;
-       if (path_list_has_path(&current_directory_set, ren1_dst)) {
-               dst_name1 = del[delp++] = unique_path(ren1_dst, branch1);
-               output("%s is a directory in %s adding as %s instead",
+       if (string_list_has_string(&o->current_directory_set, ren1_dst)) {
+               dst_name1 = del[delp++] = unique_path(o, ren1_dst, branch1);
+               output(o, 1, "%s is a directory in %s adding as %s instead",
                       ren1_dst, branch2, dst_name1);
-               remove_file(0, ren1_dst);
+               remove_file(o, 0, ren1_dst, 0);
        }
-       if (path_list_has_path(&current_directory_set, ren2_dst)) {
-               dst_name2 = del[delp++] = unique_path(ren2_dst, branch2);
-               output("%s is a directory in %s adding as %s instead",
+       if (string_list_has_string(&o->current_directory_set, ren2_dst)) {
+               dst_name2 = del[delp++] = unique_path(o, ren2_dst, branch2);
+               output(o, 1, "%s is a directory in %s adding as %s instead",
                       ren2_dst, branch1, dst_name2);
-               remove_file(0, ren2_dst);
+               remove_file(o, 0, ren2_dst, 0);
+       }
+       if (o->call_depth) {
+               remove_file_from_cache(dst_name1);
+               remove_file_from_cache(dst_name2);
+               /*
+                * Uncomment to leave the conflicting names in the resulting tree
+                *
+                * update_file(o, 0, ren1->pair->two->sha1, ren1->pair->two->mode, dst_name1);
+                * update_file(o, 0, ren2->pair->two->sha1, ren2->pair->two->mode, dst_name2);
+                */
+       } else {
+               update_stages(dst_name1, NULL, ren1->pair->two, NULL, 1);
+               update_stages(dst_name2, NULL, NULL, ren2->pair->two, 1);
        }
-       update_stages(dst_name1, NULL, ren1->pair->two, NULL, 1);
-       update_stages(dst_name2, NULL, NULL, ren2->pair->two, 1);
        while (delp--)
                free(del[delp]);
 }
 
-static void conflict_rename_dir(struct rename *ren1,
+static void conflict_rename_dir(struct merge_options *o,
+                               struct rename *ren1,
                                const char *branch1)
 {
-       char *new_path = unique_path(ren1->pair->two->path, branch1);
-       output("Renaming %s to %s instead", ren1->pair->one->path, new_path);
-       remove_file(0, ren1->pair->two->path);
-       update_file(0, ren1->pair->two->sha1, ren1->pair->two->mode, new_path);
+       char *new_path = unique_path(o, ren1->pair->two->path, branch1);
+       output(o, 1, "Renaming %s to %s instead", ren1->pair->one->path, new_path);
+       remove_file(o, 0, ren1->pair->two->path, 0);
+       update_file(o, 0, ren1->pair->two->sha1, ren1->pair->two->mode, new_path);
        free(new_path);
 }
 
-static void conflict_rename_rename_2(struct rename *ren1,
+static void conflict_rename_rename_2(struct merge_options *o,
+                                    struct rename *ren1,
                                     const char *branch1,
                                     struct rename *ren2,
                                     const char *branch2)
 {
-       char *new_path1 = unique_path(ren1->pair->two->path, branch1);
-       char *new_path2 = unique_path(ren2->pair->two->path, branch2);
-       output("Renaming %s to %s and %s to %s instead",
+       char *new_path1 = unique_path(o, ren1->pair->two->path, branch1);
+       char *new_path2 = unique_path(o, ren2->pair->two->path, branch2);
+       output(o, 1, "Renaming %s to %s and %s to %s instead",
               ren1->pair->one->path, new_path1,
               ren2->pair->one->path, new_path2);
-       remove_file(0, ren1->pair->two->path);
-       update_file(0, ren1->pair->two->sha1, ren1->pair->two->mode, new_path1);
-       update_file(0, ren2->pair->two->sha1, ren2->pair->two->mode, new_path2);
+       remove_file(o, 0, ren1->pair->two->path, 0);
+       update_file(o, 0, ren1->pair->two->sha1, ren1->pair->two->mode, new_path1);
+       update_file(o, 0, ren2->pair->two->sha1, ren2->pair->two->mode, new_path2);
        free(new_path2);
        free(new_path1);
 }
 
-static int process_renames(struct path_list *a_renames,
-                          struct path_list *b_renames,
-                          const char *a_branch,
-                          const char *b_branch)
+static int process_renames(struct merge_options *o,
+                          struct string_list *a_renames,
+                          struct string_list *b_renames)
 {
        int clean_merge = 1, i, j;
-       struct path_list a_by_dst = {NULL, 0, 0, 0}, b_by_dst = {NULL, 0, 0, 0};
+       struct string_list a_by_dst = {NULL, 0, 0, 0}, b_by_dst = {NULL, 0, 0, 0};
        const struct rename *sre;
 
        for (i = 0; i < a_renames->nr; i++) {
                sre = a_renames->items[i].util;
-               path_list_insert(sre->pair->two->path, &a_by_dst)->util
+               string_list_insert(sre->pair->two->path, &a_by_dst)->util
                        = sre->dst_entry;
        }
        for (i = 0; i < b_renames->nr; i++) {
                sre = b_renames->items[i].util;
-               path_list_insert(sre->pair->two->path, &b_by_dst)->util
+               string_list_insert(sre->pair->two->path, &b_by_dst)->util
                        = sre->dst_entry;
        }
 
        for (i = 0, j = 0; i < a_renames->nr || j < b_renames->nr;) {
-               int compare;
                char *src;
-               struct path_list *renames1, *renames2, *renames2Dst;
+               struct string_list *renames1, *renames2Dst;
                struct rename *ren1 = NULL, *ren2 = NULL;
                const char *branch1, *branch2;
                const char *ren1_src, *ren1_dst;
 
                if (i >= a_renames->nr) {
-                       compare = 1;
                        ren2 = b_renames->items[j++].util;
                } else if (j >= b_renames->nr) {
-                       compare = -1;
                        ren1 = a_renames->items[i++].util;
                } else {
-                       compare = strcmp(a_renames->items[i].path,
-                                       b_renames->items[j].path);
+                       int compare = strcmp(a_renames->items[i].string,
+                                            b_renames->items[j].string);
                        if (compare <= 0)
                                ren1 = a_renames->items[i++].util;
                        if (compare >= 0)
@@ -811,17 +823,15 @@ static int process_renames(struct path_list *a_renames,
                /* TODO: refactor, so that 1/2 are not needed */
                if (ren1) {
                        renames1 = a_renames;
-                       renames2 = b_renames;
                        renames2Dst = &b_by_dst;
-                       branch1 = a_branch;
-                       branch2 = b_branch;
+                       branch1 = o->branch1;
+                       branch2 = o->branch2;
                } else {
                        struct rename *tmp;
                        renames1 = b_renames;
-                       renames2 = a_renames;
                        renames2Dst = &a_by_dst;
-                       branch1 = b_branch;
-                       branch2 = a_branch;
+                       branch1 = o->branch2;
+                       branch2 = o->branch1;
                        tmp = ren2;
                        ren2 = ren1;
                        ren1 = tmp;
@@ -848,101 +858,112 @@ static int process_renames(struct path_list *a_renames,
                        ren2->processed = 1;
                        if (strcmp(ren1_dst, ren2_dst) != 0) {
                                clean_merge = 0;
-                               output("CONFLICT (rename/rename): "
-                                      "Rename %s->%s in branch %s "
-                                      "rename %s->%s in %s",
+                               output(o, 1, "CONFLICT (rename/rename): "
+                                      "Rename \"%s\"->\"%s\" in branch \"%s\" "
+                                      "rename \"%s\"->\"%s\" in \"%s\"%s",
                                       src, ren1_dst, branch1,
-                                      src, ren2_dst, branch2);
-                               conflict_rename_rename(ren1, branch1, ren2, branch2);
+                                      src, ren2_dst, branch2,
+                                      o->call_depth ? " (left unresolved)": "");
+                               if (o->call_depth) {
+                                       remove_file_from_cache(src);
+                                       update_file(o, 0, ren1->pair->one->sha1,
+                                                   ren1->pair->one->mode, src);
+                               }
+                               conflict_rename_rename(o, ren1, branch1, ren2, branch2);
                        } else {
                                struct merge_file_info mfi;
-                               remove_file(1, ren1_src);
-                               mfi = merge_file(ren1->pair->one,
+                               remove_file(o, 1, ren1_src, 1);
+                               mfi = merge_file(o,
+                                                ren1->pair->one,
                                                 ren1->pair->two,
                                                 ren2->pair->two,
                                                 branch1,
                                                 branch2);
                                if (mfi.merge || !mfi.clean)
-                                       output("Renaming %s->%s", src, ren1_dst);
+                                       output(o, 1, "Renaming %s->%s", src, ren1_dst);
 
                                if (mfi.merge)
-                                       output("Auto-merging %s", ren1_dst);
+                                       output(o, 2, "Auto-merging %s", ren1_dst);
 
                                if (!mfi.clean) {
-                                       output("CONFLICT (content): merge conflict in %s",
+                                       output(o, 1, "CONFLICT (content): merge conflict in %s",
                                               ren1_dst);
                                        clean_merge = 0;
 
-                                       if (!index_only)
+                                       if (!o->call_depth)
                                                update_stages(ren1_dst,
                                                              ren1->pair->one,
                                                              ren1->pair->two,
                                                              ren2->pair->two,
                                                              1 /* clear */);
                                }
-                               update_file(mfi.clean, mfi.sha, mfi.mode, ren1_dst);
+                               update_file(o, mfi.clean, mfi.sha, mfi.mode, ren1_dst);
                        }
                } else {
                        /* Renamed in 1, maybe changed in 2 */
-                       struct path_list_item *item;
+                       struct string_list_item *item;
                        /* we only use sha1 and mode of these */
                        struct diff_filespec src_other, dst_other;
                        int try_merge, stage = a_renames == renames1 ? 3: 2;
 
-                       remove_file(1, ren1_src);
+                       remove_file(o, 1, ren1_src, o->call_depth || stage == 3);
 
-                       memcpy(src_other.sha1,
-                                       ren1->src_entry->stages[stage].sha, 20);
+                       hashcpy(src_other.sha1, ren1->src_entry->stages[stage].sha);
                        src_other.mode = ren1->src_entry->stages[stage].mode;
-                       memcpy(dst_other.sha1,
-                                       ren1->dst_entry->stages[stage].sha, 20);
+                       hashcpy(dst_other.sha1, ren1->dst_entry->stages[stage].sha);
                        dst_other.mode = ren1->dst_entry->stages[stage].mode;
 
                        try_merge = 0;
 
-                       if (path_list_has_path(&current_directory_set, ren1_dst)) {
+                       if (string_list_has_string(&o->current_directory_set, ren1_dst)) {
                                clean_merge = 0;
-                               output("CONFLICT (rename/directory): Rename %s->%s in %s "
+                               output(o, 1, "CONFLICT (rename/directory): Rename %s->%s in %s "
                                       " directory %s added in %s",
                                       ren1_src, ren1_dst, branch1,
                                       ren1_dst, branch2);
-                               conflict_rename_dir(ren1, branch1);
+                               conflict_rename_dir(o, ren1, branch1);
                        } else if (sha_eq(src_other.sha1, null_sha1)) {
                                clean_merge = 0;
-                               output("CONFLICT (rename/delete): Rename %s->%s in %s "
+                               output(o, 1, "CONFLICT (rename/delete): Rename %s->%s in %s "
                                       "and deleted in %s",
                                       ren1_src, ren1_dst, branch1,
                                       branch2);
-                               update_file(0, ren1->pair->two->sha1, ren1->pair->two->mode, ren1_dst);
+                               update_file(o, 0, ren1->pair->two->sha1, ren1->pair->two->mode, ren1_dst);
+                               update_stages(ren1_dst, NULL,
+                                               branch1 == o->branch1 ?
+                                               ren1->pair->two : NULL,
+                                               branch1 == o->branch1 ?
+                                               NULL : ren1->pair->two, 1);
                        } else if (!sha_eq(dst_other.sha1, null_sha1)) {
                                const char *new_path;
                                clean_merge = 0;
                                try_merge = 1;
-                               output("CONFLICT (rename/add): Rename %s->%s in %s. "
+                               output(o, 1, "CONFLICT (rename/add): Rename %s->%s in %s. "
                                       "%s added in %s",
                                       ren1_src, ren1_dst, branch1,
                                       ren1_dst, branch2);
-                               new_path = unique_path(ren1_dst, branch2);
-                               output("Adding as %s instead", new_path);
-                               update_file(0, dst_other.sha1, dst_other.mode, new_path);
-                       } else if ((item = path_list_lookup(ren1_dst, renames2Dst))) {
+                               new_path = unique_path(o, ren1_dst, branch2);
+                               output(o, 1, "Adding as %s instead", new_path);
+                               update_file(o, 0, dst_other.sha1, dst_other.mode, new_path);
+                       } else if ((item = string_list_lookup(ren1_dst, renames2Dst))) {
                                ren2 = item->util;
                                clean_merge = 0;
                                ren2->processed = 1;
-                               output("CONFLICT (rename/rename): Rename %s->%s in %s. "
+                               output(o, 1, "CONFLICT (rename/rename): "
+                                      "Rename %s->%s in %s. "
                                       "Rename %s->%s in %s",
                                       ren1_src, ren1_dst, branch1,
                                       ren2->pair->one->path, ren2->pair->two->path, branch2);
-                               conflict_rename_rename_2(ren1, branch1, ren2, branch2);
+                               conflict_rename_rename_2(o, ren1, branch1, ren2, branch2);
                        } else
                                try_merge = 1;
 
                        if (try_merge) {
-                               struct diff_filespec *o, *a, *b;
+                               struct diff_filespec *one, *a, *b;
                                struct merge_file_info mfi;
                                src_other.path = (char *)ren1_src;
 
-                               o = ren1->pair->one;
+                               one = ren1->pair->one;
                                if (a_renames == renames1) {
                                        a = ren1->pair->two;
                                        b = &src_other;
@@ -950,55 +971,63 @@ static int process_renames(struct path_list *a_renames,
                                        b = ren1->pair->two;
                                        a = &src_other;
                                }
-                               mfi = merge_file(o, a, b,
-                                               a_branch, b_branch);
-
-                               if (mfi.merge || !mfi.clean)
-                                       output("Renaming %s => %s", ren1_src, ren1_dst);
-                               if (mfi.merge)
-                                       output("Auto-merging %s", ren1_dst);
-                               if (!mfi.clean) {
-                                       output("CONFLICT (rename/modify): Merge conflict in %s",
-                                              ren1_dst);
-                                       clean_merge = 0;
-
-                                       if (!index_only)
-                                               update_stages(ren1_dst,
-                                                               o, a, b, 1);
+                               mfi = merge_file(o, one, a, b,
+                                               o->branch1, o->branch2);
+
+                               if (mfi.clean &&
+                                   sha_eq(mfi.sha, ren1->pair->two->sha1) &&
+                                   mfi.mode == ren1->pair->two->mode)
+                                       /*
+                                        * This messaged is part of
+                                        * t6022 test. If you change
+                                        * it update the test too.
+                                        */
+                                       output(o, 3, "Skipped %s (merged same as existing)", ren1_dst);
+                               else {
+                                       if (mfi.merge || !mfi.clean)
+                                               output(o, 1, "Renaming %s => %s", ren1_src, ren1_dst);
+                                       if (mfi.merge)
+                                               output(o, 2, "Auto-merging %s", ren1_dst);
+                                       if (!mfi.clean) {
+                                               output(o, 1, "CONFLICT (rename/modify): Merge conflict in %s",
+                                                      ren1_dst);
+                                               clean_merge = 0;
+
+                                               if (!o->call_depth)
+                                                       update_stages(ren1_dst,
+                                                                     one, a, b, 1);
+                                       }
+                                       update_file(o, mfi.clean, mfi.sha, mfi.mode, ren1_dst);
                                }
-                               update_file(mfi.clean, mfi.sha, mfi.mode, ren1_dst);
                        }
                }
        }
-       path_list_clear(&a_by_dst, 0);
-       path_list_clear(&b_by_dst, 0);
+       string_list_clear(&a_by_dst, 0);
+       string_list_clear(&b_by_dst, 0);
 
-       if (cache_dirty)
-               flush_cache();
        return clean_merge;
 }
 
-static unsigned char *has_sha(const unsigned char *sha)
+static unsigned char *stage_sha(const unsigned char *sha, unsigned mode)
 {
-       return memcmp(sha, null_sha1, 20) == 0 ? NULL: (unsigned char *)sha;
+       return (is_null_sha1(sha) || mode == 0) ? NULL: (unsigned char *)sha;
 }
 
 /* Per entry merge function */
-static int process_entry(const char *path, struct stage_data *entry,
-                        const char *branch1,
-                        const char *branch2)
+static int process_entry(struct merge_options *o,
+                        const char *path, struct stage_data *entry)
 {
        /*
        printf("processing entry, clean cache: %s\n", index_only ? "yes": "no");
        print_index_entry("\tpath: ", entry);
        */
        int clean_merge = 1;
-       unsigned char *o_sha = has_sha(entry->stages[1].sha);
-       unsigned char *a_sha = has_sha(entry->stages[2].sha);
-       unsigned char *b_sha = has_sha(entry->stages[3].sha);
        unsigned o_mode = entry->stages[1].mode;
        unsigned a_mode = entry->stages[2].mode;
        unsigned b_mode = entry->stages[3].mode;
+       unsigned char *o_sha = stage_sha(entry->stages[1].sha, o_mode);
+       unsigned char *a_sha = stage_sha(entry->stages[2].sha, a_mode);
+       unsigned char *b_sha = stage_sha(entry->stages[3].sha, b_mode);
 
        if (o_sha && (!a_sha || !b_sha)) {
                /* Case A: Deleted in one */
@@ -1008,23 +1037,24 @@ static int process_entry(const char *path, struct stage_data *entry,
                        /* Deleted in both or deleted in one and
                         * unchanged in the other */
                        if (a_sha)
-                               output("Removing %s", path);
-                       remove_file(1, path);
+                               output(o, 2, "Removing %s", path);
+                       /* do not touch working file if it did not exist */
+                       remove_file(o, 1, path, !a_sha);
                } else {
                        /* Deleted in one and changed in the other */
                        clean_merge = 0;
                        if (!a_sha) {
-                               output("CONFLICT (delete/modify): %s deleted in %s "
+                               output(o, 1, "CONFLICT (delete/modify): %s deleted in %s "
                                       "and modified in %s. Version %s of %s left in tree.",
-                                      path, branch1,
-                                      branch2, branch2, path);
-                               update_file(0, b_sha, b_mode, path);
+                                      path, o->branch1,
+                                      o->branch2, o->branch2, path);
+                               update_file(o, 0, b_sha, b_mode, path);
                        } else {
-                               output("CONFLICT (delete/modify): %s deleted in %s "
+                               output(o, 1, "CONFLICT (delete/modify): %s deleted in %s "
                                       "and modified in %s. Version %s of %s left in tree.",
-                                      path, branch2,
-                                      branch1, branch1, path);
-                               update_file(0, a_sha, a_mode, path);
+                                      path, o->branch2,
+                                      o->branch1, o->branch1, path);
+                               update_file(o, 0, a_sha, a_mode, path);
                        }
                }
 
@@ -1038,308 +1068,321 @@ static int process_entry(const char *path, struct stage_data *entry,
                const char *conf;
 
                if (a_sha) {
-                       add_branch = branch1;
-                       other_branch = branch2;
+                       add_branch = o->branch1;
+                       other_branch = o->branch2;
                        mode = a_mode;
                        sha = a_sha;
                        conf = "file/directory";
                } else {
-                       add_branch = branch2;
-                       other_branch = branch1;
+                       add_branch = o->branch2;
+                       other_branch = o->branch1;
                        mode = b_mode;
                        sha = b_sha;
                        conf = "directory/file";
                }
-               if (path_list_has_path(&current_directory_set, path)) {
-                       const char *new_path = unique_path(path, add_branch);
+               if (string_list_has_string(&o->current_directory_set, path)) {
+                       const char *new_path = unique_path(o, path, add_branch);
                        clean_merge = 0;
-                       output("CONFLICT (%s): There is a directory with name %s in %s. "
+                       output(o, 1, "CONFLICT (%s): There is a directory with name %s in %s. "
                               "Adding %s as %s",
                               conf, path, other_branch, path, new_path);
-                       remove_file(0, path);
-                       update_file(0, sha, mode, new_path);
+                       remove_file(o, 0, path, 0);
+                       update_file(o, 0, sha, mode, new_path);
                } else {
-                       output("Adding %s", path);
-                       update_file(1, sha, mode, path);
+                       output(o, 2, "Adding %s", path);
+                       update_file(o, 1, sha, mode, path);
                }
-       } else if (!o_sha && a_sha && b_sha) {
-               /* Case C: Added in both (check for same permissions). */
-               if (sha_eq(a_sha, b_sha)) {
-                       if (a_mode != b_mode) {
-                               clean_merge = 0;
-                               output("CONFLICT: File %s added identically in both branches, "
-                                      "but permissions conflict %06o->%06o",
-                                      path, a_mode, b_mode);
-                               output("CONFLICT: adding with permission: %06o", a_mode);
-                               update_file(0, a_sha, a_mode, path);
-                       } else {
-                               /* This case is handled by git-read-tree */
-                               assert(0 && "This case must be handled by git-read-tree");
-                       }
-               } else {
-                       const char *new_path1, *new_path2;
-                       clean_merge = 0;
-                       new_path1 = unique_path(path, branch1);
-                       new_path2 = unique_path(path, branch2);
-                       output("CONFLICT (add/add): File %s added non-identically "
-                              "in both branches. Adding as %s and %s instead.",
-                              path, new_path1, new_path2);
-                       remove_file(0, path);
-                       update_file(0, a_sha, a_mode, new_path1);
-                       update_file(0, b_sha, b_mode, new_path2);
-               }
-
-       } else if (o_sha && a_sha && b_sha) {
+       } else if (a_sha && b_sha) {
+               /* Case C: Added in both (check for same permissions) and */
                /* case D: Modified in both, but differently. */
+               const char *reason = "content";
                struct merge_file_info mfi;
-               struct diff_filespec o, a, b;
+               struct diff_filespec one, a, b;
 
-               output("Auto-merging %s", path);
-               o.path = a.path = b.path = (char *)path;
-               memcpy(o.sha1, o_sha, 20);
-               o.mode = o_mode;
-               memcpy(a.sha1, a_sha, 20);
+               if (!o_sha) {
+                       reason = "add/add";
+                       o_sha = (unsigned char *)null_sha1;
+               }
+               output(o, 2, "Auto-merging %s", path);
+               one.path = a.path = b.path = (char *)path;
+               hashcpy(one.sha1, o_sha);
+               one.mode = o_mode;
+               hashcpy(a.sha1, a_sha);
                a.mode = a_mode;
-               memcpy(b.sha1, b_sha, 20);
+               hashcpy(b.sha1, b_sha);
                b.mode = b_mode;
 
-               mfi = merge_file(&o, &a, &b,
-                                branch1, branch2);
+               mfi = merge_file(o, &one, &a, &b,
+                                o->branch1, o->branch2);
 
+               clean_merge = mfi.clean;
                if (mfi.clean)
-                       update_file(1, mfi.sha, mfi.mode, path);
+                       update_file(o, 1, mfi.sha, mfi.mode, path);
+               else if (S_ISGITLINK(mfi.mode))
+                       output(o, 1, "CONFLICT (submodule): Merge conflict in %s "
+                              "- needs %s", path, sha1_to_hex(b.sha1));
                else {
-                       clean_merge = 0;
-                       output("CONFLICT (content): Merge conflict in %s", path);
+                       output(o, 1, "CONFLICT (%s): Merge conflict in %s",
+                                       reason, path);
 
-                       if (index_only)
-                               update_file(0, mfi.sha, mfi.mode, path);
+                       if (o->call_depth)
+                               update_file(o, 0, mfi.sha, mfi.mode, path);
                        else
-                               update_file_flags(mfi.sha, mfi.mode, path,
+                               update_file_flags(o, mfi.sha, mfi.mode, path,
                                              0 /* update_cache */, 1 /* update_working_directory */);
                }
+       } else if (!o_sha && !a_sha && !b_sha) {
+               /*
+                * this entry was deleted altogether. a_mode == 0 means
+                * we had that path and want to actively remove it.
+                */
+               remove_file(o, 1, path, !a_mode);
        } else
                die("Fatal merge failure, shouldn't happen.");
 
-       if (cache_dirty)
-               flush_cache();
-
        return clean_merge;
 }
 
-static int merge_trees(struct tree *head,
-                      struct tree *merge,
-                      struct tree *common,
-                      const char *branch1,
-                      const char *branch2,
-                      struct tree **result)
+int merge_trees(struct merge_options *o,
+               struct tree *head,
+               struct tree *merge,
+               struct tree *common,
+               struct tree **result)
 {
        int code, clean;
+
+       if (o->subtree_merge) {
+               merge = shift_tree_object(head, merge);
+               common = shift_tree_object(head, common);
+       }
+
        if (sha_eq(common->object.sha1, merge->object.sha1)) {
-               output("Already uptodate!");
+               output(o, 0, "Already uptodate!");
                *result = head;
                return 1;
        }
 
-       code = git_merge_trees(index_only, common, head, merge);
+       code = git_merge_trees(o->call_depth, common, head, merge);
 
        if (code != 0)
                die("merging of trees %s and %s failed",
                    sha1_to_hex(head->object.sha1),
                    sha1_to_hex(merge->object.sha1));
 
-       *result = git_write_tree();
-
-       if (!*result) {
-               struct path_list *entries, *re_head, *re_merge;
+       if (unmerged_cache()) {
+               struct string_list *entries, *re_head, *re_merge;
                int i;
-               path_list_clear(&current_file_set, 1);
-               path_list_clear(&current_directory_set, 1);
-               get_files_dirs(head);
-               get_files_dirs(merge);
+               string_list_clear(&o->current_file_set, 1);
+               string_list_clear(&o->current_directory_set, 1);
+               get_files_dirs(o, head);
+               get_files_dirs(o, merge);
 
                entries = get_unmerged();
-               re_head  = get_renames(head, common, head, merge, entries);
-               re_merge = get_renames(merge, common, head, merge, entries);
-               clean = process_renames(re_head, re_merge,
-                               branch1, branch2);
+               re_head  = get_renames(o, head, common, head, merge, entries);
+               re_merge = get_renames(o, merge, common, head, merge, entries);
+               clean = process_renames(o, re_head, re_merge);
                for (i = 0; i < entries->nr; i++) {
-                       const char *path = entries->items[i].path;
+                       const char *path = entries->items[i].string;
                        struct stage_data *e = entries->items[i].util;
-                       if (e->processed)
-                               continue;
-                       if (!process_entry(path, e, branch1, branch2))
+                       if (!e->processed
+                               && !process_entry(o, path, e))
                                clean = 0;
                }
 
-               path_list_clear(re_merge, 0);
-               path_list_clear(re_head, 0);
-               path_list_clear(entries, 1);
+               string_list_clear(re_merge, 0);
+               string_list_clear(re_head, 0);
+               string_list_clear(entries, 1);
 
-               if (clean || index_only)
-                       *result = git_write_tree();
-               else
-                       *result = NULL;
-       } else {
-               clean = 1;
-               printf("merging of trees %s and %s resulted in %s\n",
-                      sha1_to_hex(head->object.sha1),
-                      sha1_to_hex(merge->object.sha1),
-                      sha1_to_hex((*result)->object.sha1));
        }
+       else
+               clean = 1;
+
+       if (o->call_depth)
+               *result = write_tree_from_memory(o);
 
        return clean;
 }
 
+static struct commit_list *reverse_commit_list(struct commit_list *list)
+{
+       struct commit_list *next = NULL, *current, *backup;
+       for (current = list; current; current = backup) {
+               backup = current->next;
+               current->next = next;
+               next = current;
+       }
+       return next;
+}
+
 /*
  * Merge the commits h1 and h2, return the resulting virtual
- * commit object and a flag indicating the cleaness of the merge.
+ * commit object and a flag indicating the cleanness of the merge.
  */
-static
-int merge(struct commit *h1,
-                         struct commit *h2,
-                         const char *branch1,
-                         const char *branch2,
-                         int call_depth /* =0 */,
-                         struct commit *ancestor /* =None */,
-                         struct commit **result)
+int merge_recursive(struct merge_options *o,
+                   struct commit *h1,
+                   struct commit *h2,
+                   struct commit_list *ca,
+                   struct commit **result)
 {
-       struct commit_list *ca = NULL, *iter;
+       struct commit_list *iter;
        struct commit *merged_common_ancestors;
-       struct tree *mrtree;
+       struct tree *mrtree = mrtree;
        int clean;
 
-       output("Merging:");
-       output_commit_title(h1);
-       output_commit_title(h2);
+       if (show(o, 4)) {
+               output(o, 4, "Merging:");
+               output_commit_title(o, h1);
+               output_commit_title(o, h2);
+       }
 
-       if (ancestor)
-               commit_list_insert(ancestor, &ca);
-       else
+       if (!ca) {
                ca = get_merge_bases(h1, h2, 1);
+               ca = reverse_commit_list(ca);
+       }
 
-       output("found %u common ancestor(s):", commit_list_count(ca));
-       for (iter = ca; iter; iter = iter->next)
-               output_commit_title(iter->item);
+       if (show(o, 5)) {
+               output(o, 5, "found %u common ancestor(s):", commit_list_count(ca));
+               for (iter = ca; iter; iter = iter->next)
+                       output_commit_title(o, iter->item);
+       }
 
        merged_common_ancestors = pop_commit(&ca);
        if (merged_common_ancestors == NULL) {
                /* if there is no common ancestor, make an empty tree */
                struct tree *tree = xcalloc(1, sizeof(struct tree));
-               unsigned char hdr[40];
-               int hdrlen;
 
                tree->object.parsed = 1;
                tree->object.type = OBJ_TREE;
-               write_sha1_file_prepare(NULL, 0, tree_type, tree->object.sha1,
-                                       hdr, &hdrlen);
+               pretend_sha1_file(NULL, 0, OBJ_TREE, tree->object.sha1);
                merged_common_ancestors = make_virtual_commit(tree, "ancestor");
        }
 
        for (iter = ca; iter; iter = iter->next) {
-               output_indent = call_depth + 1;
+               const char *saved_b1, *saved_b2;
+               o->call_depth++;
                /*
                 * When the merge fails, the result contains files
                 * with conflict markers. The cleanness flag is
-                * ignored, it was never acutally used, as result of
-                * merge_trees has always overwritten it: the commited
+                * ignored, it was never actually used, as result of
+                * merge_trees has always overwritten it: the committed
                 * "conflicts" were already resolved.
                 */
-               merge(merged_common_ancestors, iter->item,
-                     "Temporary merge branch 1",
-                     "Temporary merge branch 2",
-                     call_depth + 1,
-                     NULL,
-                     &merged_common_ancestors);
-               output_indent = call_depth;
+               discard_cache();
+               saved_b1 = o->branch1;
+               saved_b2 = o->branch2;
+               o->branch1 = "Temporary merge branch 1";
+               o->branch2 = "Temporary merge branch 2";
+               merge_recursive(o, merged_common_ancestors, iter->item,
+                               NULL, &merged_common_ancestors);
+               o->branch1 = saved_b1;
+               o->branch2 = saved_b2;
+               o->call_depth--;
 
                if (!merged_common_ancestors)
                        die("merge returned no commit");
        }
 
-       if (call_depth == 0) {
-               setup_index(0 /* $GIT_DIR/index */);
-               index_only = 0;
-       } else {
-               setup_index(1 /* temporary index */);
-               git_read_tree(h1->tree);
-               index_only = 1;
-       }
+       discard_cache();
+       if (!o->call_depth)
+               read_cache();
 
-       clean = merge_trees(h1->tree, h2->tree, merged_common_ancestors->tree,
-                           branch1, branch2, &mrtree);
+       clean = merge_trees(o, h1->tree, h2->tree, merged_common_ancestors->tree,
+                           &mrtree);
 
-       if (!ancestor && (clean || index_only)) {
+       if (o->call_depth) {
                *result = make_virtual_commit(mrtree, "merged tree");
                commit_list_insert(h1, &(*result)->parents);
                commit_list_insert(h2, &(*result)->parents->next);
-       } else
-               *result = NULL;
-
+       }
+       flush_output(o);
        return clean;
 }
 
-static struct commit *get_ref(const char *ref)
+static struct commit *get_ref(const unsigned char *sha1, const char *name)
 {
-       unsigned char sha1[20];
        struct object *object;
 
-       if (get_sha1(ref, sha1))
-               die("Could not resolve ref '%s'", ref);
-       object = deref_tag(parse_object(sha1), ref, strlen(ref));
+       object = deref_tag(parse_object(sha1), name, strlen(name));
+       if (!object)
+               return NULL;
+       if (object->type == OBJ_TREE)
+               return make_virtual_commit((struct tree*)object, name);
        if (object->type != OBJ_COMMIT)
                return NULL;
        if (parse_commit((struct commit *)object))
-               die("Could not parse commit '%s'", sha1_to_hex(object->sha1));
+               return NULL;
        return (struct commit *)object;
 }
 
-int main(int argc, char *argv[])
+int merge_recursive_generic(struct merge_options *o,
+                           const unsigned char *head,
+                           const unsigned char *merge,
+                           int num_base_list,
+                           const unsigned char **base_list,
+                           struct commit **result)
 {
-       static const char *bases[2];
-       static unsigned bases_count = 0;
-       int i, clean;
-       const char *branch1, *branch2;
-       struct commit *result, *h1, *h2;
-
-       original_index_file = getenv("GIT_INDEX_FILE");
-
-       if (!original_index_file)
-               original_index_file = strdup(git_path("index"));
-
-       temporary_index_file = strdup(git_path("mrg-rcrsv-tmp-idx"));
-
-       if (argc < 4)
-               die("Usage: %s <base>... -- <head> <remote> ...\n", argv[0]);
+       int clean, index_fd;
+       struct lock_file *lock = xcalloc(1, sizeof(struct lock_file));
+       struct commit *head_commit = get_ref(head, o->branch1);
+       struct commit *next_commit = get_ref(merge, o->branch2);
+       struct commit_list *ca = NULL;
 
-       for (i = 1; i < argc; ++i) {
-               if (!strcmp(argv[i], "--"))
-                       break;
-               if (bases_count < sizeof(bases)/sizeof(*bases))
-                       bases[bases_count++] = argv[i];
+       if (base_list) {
+               int i;
+               for (i = 0; i < num_base_list; ++i) {
+                       struct commit *base;
+                       if (!(base = get_ref(base_list[i], sha1_to_hex(base_list[i]))))
+                               return error("Could not parse object '%s'",
+                                       sha1_to_hex(base_list[i]));
+                       commit_list_insert(base, &ca);
+               }
        }
-       if (argc - i != 3) /* "--" "<head>" "<remote>" */
-               die("Not handling anything other than two heads merge.");
 
-       branch1 = argv[++i];
-       branch2 = argv[++i];
-       printf("Merging %s with %s\n", branch1, branch2);
-
-       h1 = get_ref(branch1);
-       h2 = get_ref(branch2);
-
-       if (bases_count == 1) {
-               struct commit *ancestor = get_ref(bases[0]);
-               clean = merge(h1, h2, branch1, branch2, 0, ancestor, &result);
-       } else
-               clean = merge(h1, h2, branch1, branch2, 0, NULL, &result);
+       index_fd = hold_locked_index(lock, 1);
+       clean = merge_recursive(o, head_commit, next_commit, ca,
+                       result);
+       if (active_cache_changed &&
+                       (write_cache(index_fd, active_cache, active_nr) ||
+                        commit_locked_index(lock)))
+               return error("Unable to write index.");
 
-       if (cache_dirty)
-               flush_cache();
+       return clean ? 0 : 1;
+}
 
-       return clean ? 0: 1;
+static int merge_recursive_config(const char *var, const char *value, void *cb)
+{
+       struct merge_options *o = cb;
+       if (!strcasecmp(var, "merge.verbosity")) {
+               o->verbosity = git_config_int(var, value);
+               return 0;
+       }
+       if (!strcasecmp(var, "diff.renamelimit")) {
+               o->diff_rename_limit = git_config_int(var, value);
+               return 0;
+       }
+       if (!strcasecmp(var, "merge.renamelimit")) {
+               o->merge_rename_limit = git_config_int(var, value);
+               return 0;
+       }
+       return git_xmerge_config(var, value, cb);
 }
 
-/*
-vim: sw=8 noet
-*/
+void init_merge_options(struct merge_options *o)
+{
+       memset(o, 0, sizeof(struct merge_options));
+       o->verbosity = 2;
+       o->buffer_output = 1;
+       o->diff_rename_limit = -1;
+       o->merge_rename_limit = -1;
+       git_config(merge_recursive_config, o);
+       if (getenv("GIT_MERGE_VERBOSITY"))
+               o->verbosity =
+                       strtol(getenv("GIT_MERGE_VERBOSITY"), NULL, 10);
+       if (o->verbosity >= 5)
+               o->buffer_output = 0;
+       strbuf_init(&o->obuf, 0);
+       memset(&o->current_file_set, 0, sizeof(struct string_list));
+       o->current_file_set.strdup_strings = 1;
+       memset(&o->current_directory_set, 0, sizeof(struct string_list));
+       o->current_directory_set.strdup_strings = 1;
+}