khash.hon commit Merge branch 'sb/config-write-fix' (2a2c18f)
   1/* The MIT License
   2
   3   Copyright (c) 2008, 2009, 2011 by Attractive Chaos <attractor@live.co.uk>
   4
   5   Permission is hereby granted, free of charge, to any person obtaining
   6   a copy of this software and associated documentation files (the
   7   "Software"), to deal in the Software without restriction, including
   8   without limitation the rights to use, copy, modify, merge, publish,
   9   distribute, sublicense, and/or sell copies of the Software, and to
  10   permit persons to whom the Software is furnished to do so, subject to
  11   the following conditions:
  12
  13   The above copyright notice and this permission notice shall be
  14   included in all copies or substantial portions of the Software.
  15
  16   THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
  17   EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
  18   MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
  19   NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS
  20   BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN
  21   ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN
  22   CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
  23   SOFTWARE.
  24*/
  25
  26#ifndef __AC_KHASH_H
  27#define __AC_KHASH_H
  28
  29#include "cache.h"
  30#include "hashmap.h"
  31
  32#define AC_VERSION_KHASH_H "0.2.8"
  33
  34typedef uint32_t khint32_t;
  35typedef uint64_t khint64_t;
  36
  37typedef khint32_t khint_t;
  38typedef khint_t khiter_t;
  39
  40#define __ac_isempty(flag, i) ((flag[i>>4]>>((i&0xfU)<<1))&2)
  41#define __ac_isdel(flag, i) ((flag[i>>4]>>((i&0xfU)<<1))&1)
  42#define __ac_iseither(flag, i) ((flag[i>>4]>>((i&0xfU)<<1))&3)
  43#define __ac_set_isdel_false(flag, i) (flag[i>>4]&=~(1ul<<((i&0xfU)<<1)))
  44#define __ac_set_isempty_false(flag, i) (flag[i>>4]&=~(2ul<<((i&0xfU)<<1)))
  45#define __ac_set_isboth_false(flag, i) (flag[i>>4]&=~(3ul<<((i&0xfU)<<1)))
  46#define __ac_set_isdel_true(flag, i) (flag[i>>4]|=1ul<<((i&0xfU)<<1))
  47
  48#define __ac_fsize(m) ((m) < 16? 1 : (m)>>4)
  49
  50#define kroundup32(x) (--(x), (x)|=(x)>>1, (x)|=(x)>>2, (x)|=(x)>>4, (x)|=(x)>>8, (x)|=(x)>>16, ++(x))
  51
  52static inline khint_t __ac_X31_hash_string(const char *s)
  53{
  54        khint_t h = (khint_t)*s;
  55        if (h) for (++s ; *s; ++s) h = (h << 5) - h + (khint_t)*s;
  56        return h;
  57}
  58
  59#define kh_str_hash_func(key) __ac_X31_hash_string(key)
  60#define kh_str_hash_equal(a, b) (strcmp(a, b) == 0)
  61
  62static const double __ac_HASH_UPPER = 0.77;
  63
  64#define __KHASH_TYPE(name, khkey_t, khval_t) \
  65        typedef struct { \
  66                khint_t n_buckets, size, n_occupied, upper_bound; \
  67                khint32_t *flags; \
  68                khkey_t *keys; \
  69                khval_t *vals; \
  70        } kh_##name##_t;
  71
  72#define __KHASH_PROTOTYPES(name, khkey_t, khval_t)                                              \
  73        extern kh_##name##_t *kh_init_##name(void);                                                     \
  74        extern void kh_destroy_##name(kh_##name##_t *h);                                        \
  75        extern void kh_clear_##name(kh_##name##_t *h);                                          \
  76        extern khint_t kh_get_##name(const kh_##name##_t *h, khkey_t key);      \
  77        extern int kh_resize_##name(kh_##name##_t *h, khint_t new_n_buckets); \
  78        extern khint_t kh_put_##name(kh_##name##_t *h, khkey_t key, int *ret); \
  79        extern void kh_del_##name(kh_##name##_t *h, khint_t x);
  80
  81#define __KHASH_IMPL(name, SCOPE, khkey_t, khval_t, kh_is_map, __hash_func, __hash_equal) \
  82        SCOPE kh_##name##_t *kh_init_##name(void) {                                                     \
  83                return (kh_##name##_t*)xcalloc(1, sizeof(kh_##name##_t));               \
  84        }                                                                                                                                       \
  85        SCOPE void kh_destroy_##name(kh_##name##_t *h)                                          \
  86        {                                                                                                                                       \
  87                if (h) {                                                                                                                \
  88                        free((void *)h->keys); free(h->flags);                                  \
  89                        free((void *)h->vals);                                                                          \
  90                        free(h);                                                                                                        \
  91                }                                                                                                                               \
  92        }                                                                                                                                       \
  93        SCOPE void kh_clear_##name(kh_##name##_t *h)                                            \
  94        {                                                                                                                                       \
  95                if (h && h->flags) {                                                                                    \
  96                        memset(h->flags, 0xaa, __ac_fsize(h->n_buckets) * sizeof(khint32_t)); \
  97                        h->size = h->n_occupied = 0;                                                            \
  98                }                                                                                                                               \
  99        }                                                                                                                                       \
 100        SCOPE khint_t kh_get_##name(const kh_##name##_t *h, khkey_t key)        \
 101        {                                                                                                                                       \
 102                if (h->n_buckets) {                                                                                             \
 103                        khint_t k, i, last, mask, step = 0; \
 104                        mask = h->n_buckets - 1;                                                                        \
 105                        k = __hash_func(key); i = k & mask;                                                     \
 106                        last = i; \
 107                        while (!__ac_isempty(h->flags, i) && (__ac_isdel(h->flags, i) || !__hash_equal(h->keys[i], key))) { \
 108                                i = (i + (++step)) & mask; \
 109                                if (i == last) return h->n_buckets;                                             \
 110                        }                                                                                                                       \
 111                        return __ac_iseither(h->flags, i)? h->n_buckets : i;            \
 112                } else return 0;                                                                                                \
 113        }                                                                                                                                       \
 114        SCOPE int kh_resize_##name(kh_##name##_t *h, khint_t new_n_buckets) \
 115        { /* This function uses 0.25*n_buckets bytes of working space instead of [sizeof(key_t+val_t)+.25]*n_buckets. */ \
 116                khint32_t *new_flags = NULL;                                                                            \
 117                khint_t j = 1;                                                                                                  \
 118                {                                                                                                                               \
 119                        kroundup32(new_n_buckets);                                                                      \
 120                        if (new_n_buckets < 4) new_n_buckets = 4;                                       \
 121                        if (h->size >= (khint_t)(new_n_buckets * __ac_HASH_UPPER + 0.5)) j = 0; /* requested size is too small */ \
 122                        else { /* hash table size to be changed (shrink or expand); rehash */ \
 123                                ALLOC_ARRAY(new_flags, __ac_fsize(new_n_buckets)); \
 124                                if (!new_flags) return -1;                                                              \
 125                                memset(new_flags, 0xaa, __ac_fsize(new_n_buckets) * sizeof(khint32_t)); \
 126                                if (h->n_buckets < new_n_buckets) {     /* expand */            \
 127                                        REALLOC_ARRAY(h->keys, new_n_buckets); \
 128                                        if (kh_is_map) {                                                                        \
 129                                                REALLOC_ARRAY(h->vals, new_n_buckets); \
 130                                        }                                                                                                       \
 131                                } /* otherwise shrink */                                                                \
 132                        }                                                                                                                       \
 133                }                                                                                                                               \
 134                if (j) { /* rehashing is needed */                                                              \
 135                        for (j = 0; j != h->n_buckets; ++j) {                                           \
 136                                if (__ac_iseither(h->flags, j) == 0) {                                  \
 137                                        khkey_t key = h->keys[j];                                                       \
 138                                        khval_t val;                                                                            \
 139                                        khint_t new_mask;                                                                       \
 140                                        new_mask = new_n_buckets - 1;                                           \
 141                                        if (kh_is_map) val = h->vals[j];                                        \
 142                                        __ac_set_isdel_true(h->flags, j);                                       \
 143                                        while (1) { /* kick-out process; sort of like in Cuckoo hashing */ \
 144                                                khint_t k, i, step = 0; \
 145                                                k = __hash_func(key);                                                   \
 146                                                i = k & new_mask;                                                               \
 147                                                while (!__ac_isempty(new_flags, i)) i = (i + (++step)) & new_mask; \
 148                                                __ac_set_isempty_false(new_flags, i);                   \
 149                                                if (i < h->n_buckets && __ac_iseither(h->flags, i) == 0) { /* kick out the existing element */ \
 150                                                        { khkey_t tmp = h->keys[i]; h->keys[i] = key; key = tmp; } \
 151                                                        if (kh_is_map) { khval_t tmp = h->vals[i]; h->vals[i] = val; val = tmp; } \
 152                                                        __ac_set_isdel_true(h->flags, i); /* mark it as deleted in the old hash table */ \
 153                                                } else { /* write the element and jump out of the loop */ \
 154                                                        h->keys[i] = key;                                                       \
 155                                                        if (kh_is_map) h->vals[i] = val;                        \
 156                                                        break;                                                                          \
 157                                                }                                                                                               \
 158                                        }                                                                                                       \
 159                                }                                                                                                               \
 160                        }                                                                                                                       \
 161                        if (h->n_buckets > new_n_buckets) { /* shrink the hash table */ \
 162                                REALLOC_ARRAY(h->keys, new_n_buckets); \
 163                                if (kh_is_map) REALLOC_ARRAY(h->vals, new_n_buckets); \
 164                        }                                                                                                                       \
 165                        free(h->flags); /* free the working space */                            \
 166                        h->flags = new_flags;                                                                           \
 167                        h->n_buckets = new_n_buckets;                                                           \
 168                        h->n_occupied = h->size;                                                                        \
 169                        h->upper_bound = (khint_t)(h->n_buckets * __ac_HASH_UPPER + 0.5); \
 170                }                                                                                                                               \
 171                return 0;                                                                                                               \
 172        }                                                                                                                                       \
 173        SCOPE khint_t kh_put_##name(kh_##name##_t *h, khkey_t key, int *ret) \
 174        {                                                                                                                                       \
 175                khint_t x;                                                                                                              \
 176                if (h->n_occupied >= h->upper_bound) { /* update the hash table */ \
 177                        if (h->n_buckets > (h->size<<1)) {                                                      \
 178                                if (kh_resize_##name(h, h->n_buckets - 1) < 0) { /* clear "deleted" elements */ \
 179                                        *ret = -1; return h->n_buckets;                                         \
 180                                }                                                                                                               \
 181                        } else if (kh_resize_##name(h, h->n_buckets + 1) < 0) { /* expand the hash table */ \
 182                                *ret = -1; return h->n_buckets;                                                 \
 183                        }                                                                                                                       \
 184                } /* TODO: to implement automatically shrinking; resize() already support shrinking */ \
 185                {                                                                                                                               \
 186                        khint_t k, i, site, last, mask = h->n_buckets - 1, step = 0; \
 187                        x = site = h->n_buckets; k = __hash_func(key); i = k & mask; \
 188                        if (__ac_isempty(h->flags, i)) x = i; /* for speed up */        \
 189                        else {                                                                                                          \
 190                                last = i; \
 191                                while (!__ac_isempty(h->flags, i) && (__ac_isdel(h->flags, i) || !__hash_equal(h->keys[i], key))) { \
 192                                        if (__ac_isdel(h->flags, i)) site = i;                          \
 193                                        i = (i + (++step)) & mask; \
 194                                        if (i == last) { x = site; break; }                                     \
 195                                }                                                                                                               \
 196                                if (x == h->n_buckets) {                                                                \
 197                                        if (__ac_isempty(h->flags, i) && site != h->n_buckets) x = site; \
 198                                        else x = i;                                                                                     \
 199                                }                                                                                                               \
 200                        }                                                                                                                       \
 201                }                                                                                                                               \
 202                if (__ac_isempty(h->flags, x)) { /* not present at all */               \
 203                        h->keys[x] = key;                                                                                       \
 204                        __ac_set_isboth_false(h->flags, x);                                                     \
 205                        ++h->size; ++h->n_occupied;                                                                     \
 206                        *ret = 1;                                                                                                       \
 207                } else if (__ac_isdel(h->flags, x)) { /* deleted */                             \
 208                        h->keys[x] = key;                                                                                       \
 209                        __ac_set_isboth_false(h->flags, x);                                                     \
 210                        ++h->size;                                                                                                      \
 211                        *ret = 2;                                                                                                       \
 212                } else *ret = 0; /* Don't touch h->keys[x] if present and not deleted */ \
 213                return x;                                                                                                               \
 214        }                                                                                                                                       \
 215        SCOPE void kh_del_##name(kh_##name##_t *h, khint_t x)                           \
 216        {                                                                                                                                       \
 217                if (x != h->n_buckets && !__ac_iseither(h->flags, x)) {                 \
 218                        __ac_set_isdel_true(h->flags, x);                                                       \
 219                        --h->size;                                                                                                      \
 220                }                                                                                                                               \
 221        }
 222
 223#define KHASH_DECLARE(name, khkey_t, khval_t)                                                   \
 224        __KHASH_TYPE(name, khkey_t, khval_t)                                                            \
 225        __KHASH_PROTOTYPES(name, khkey_t, khval_t)
 226
 227#define KHASH_INIT2(name, SCOPE, khkey_t, khval_t, kh_is_map, __hash_func, __hash_equal) \
 228        __KHASH_TYPE(name, khkey_t, khval_t)                                                            \
 229        __KHASH_IMPL(name, SCOPE, khkey_t, khval_t, kh_is_map, __hash_func, __hash_equal)
 230
 231#define KHASH_INIT(name, khkey_t, khval_t, kh_is_map, __hash_func, __hash_equal) \
 232        KHASH_INIT2(name, static inline, khkey_t, khval_t, kh_is_map, __hash_func, __hash_equal)
 233
 234/* Other convenient macros... */
 235
 236/*! @function
 237  @abstract     Test whether a bucket contains data.
 238  @param  h     Pointer to the hash table [khash_t(name)*]
 239  @param  x     Iterator to the bucket [khint_t]
 240  @return       1 if containing data; 0 otherwise [int]
 241 */
 242#define kh_exist(h, x) (!__ac_iseither((h)->flags, (x)))
 243
 244/*! @function
 245  @abstract     Get key given an iterator
 246  @param  h     Pointer to the hash table [khash_t(name)*]
 247  @param  x     Iterator to the bucket [khint_t]
 248  @return       Key [type of keys]
 249 */
 250#define kh_key(h, x) ((h)->keys[x])
 251
 252/*! @function
 253  @abstract     Get value given an iterator
 254  @param  h     Pointer to the hash table [khash_t(name)*]
 255  @param  x     Iterator to the bucket [khint_t]
 256  @return       Value [type of values]
 257  @discussion   For hash sets, calling this results in segfault.
 258 */
 259#define kh_val(h, x) ((h)->vals[x])
 260
 261/*! @function
 262  @abstract     Alias of kh_val()
 263 */
 264#define kh_value(h, x) ((h)->vals[x])
 265
 266/*! @function
 267  @abstract     Get the start iterator
 268  @param  h     Pointer to the hash table [khash_t(name)*]
 269  @return       The start iterator [khint_t]
 270 */
 271#define kh_begin(h) (khint_t)(0)
 272
 273/*! @function
 274  @abstract     Get the end iterator
 275  @param  h     Pointer to the hash table [khash_t(name)*]
 276  @return       The end iterator [khint_t]
 277 */
 278#define kh_end(h) ((h)->n_buckets)
 279
 280/*! @function
 281  @abstract     Get the number of elements in the hash table
 282  @param  h     Pointer to the hash table [khash_t(name)*]
 283  @return       Number of elements in the hash table [khint_t]
 284 */
 285#define kh_size(h) ((h)->size)
 286
 287/*! @function
 288  @abstract     Get the number of buckets in the hash table
 289  @param  h     Pointer to the hash table [khash_t(name)*]
 290  @return       Number of buckets in the hash table [khint_t]
 291 */
 292#define kh_n_buckets(h) ((h)->n_buckets)
 293
 294/*! @function
 295  @abstract     Iterate over the entries in the hash table
 296  @param  h     Pointer to the hash table [khash_t(name)*]
 297  @param  kvar  Variable to which key will be assigned
 298  @param  vvar  Variable to which value will be assigned
 299  @param  code  Block of code to execute
 300 */
 301#define kh_foreach(h, kvar, vvar, code) { khint_t __i;          \
 302        for (__i = kh_begin(h); __i != kh_end(h); ++__i) {              \
 303                if (!kh_exist(h,__i)) continue;                                         \
 304                (kvar) = kh_key(h,__i);                                                         \
 305                (vvar) = kh_val(h,__i);                                                         \
 306                code;                                                                                           \
 307        } }
 308
 309/*! @function
 310  @abstract     Iterate over the values in the hash table
 311  @param  h     Pointer to the hash table [khash_t(name)*]
 312  @param  vvar  Variable to which value will be assigned
 313  @param  code  Block of code to execute
 314 */
 315#define kh_foreach_value(h, vvar, code) { khint_t __i;          \
 316        for (__i = kh_begin(h); __i != kh_end(h); ++__i) {              \
 317                if (!kh_exist(h,__i)) continue;                                         \
 318                (vvar) = kh_val(h,__i);                                                         \
 319                code;                                                                                           \
 320        } }
 321
 322#define __kh_oid_cmp(a, b) (hashcmp(a, b) == 0)
 323
 324KHASH_INIT(sha1, const unsigned char *, void *, 1, sha1hash, __kh_oid_cmp)
 325typedef kh_sha1_t khash_sha1;
 326
 327KHASH_INIT(sha1_pos, const unsigned char *, int, 1, sha1hash, __kh_oid_cmp)
 328typedef kh_sha1_pos_t khash_sha1_pos;
 329
 330#endif /* __AC_KHASH_H */