ewah / ewok.hon commit pull: set reflog message (41fca09)
   1/**
   2 * Copyright 2013, GitHub, Inc
   3 * Copyright 2009-2013, Daniel Lemire, Cliff Moon,
   4 *      David McIntosh, Robert Becho, Google Inc. and Veronika Zenz
   5 *
   6 * This program is free software; you can redistribute it and/or
   7 * modify it under the terms of the GNU General Public License
   8 * as published by the Free Software Foundation; either version 2
   9 * of the License, or (at your option) any later version.
  10 *
  11 * This program is distributed in the hope that it will be useful,
  12 * but WITHOUT ANY WARRANTY; without even the implied warranty of
  13 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
  14 * GNU General Public License for more details.
  15 *
  16 * You should have received a copy of the GNU General Public License
  17 * along with this program; if not, write to the Free Software
  18 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA.
  19 */
  20#ifndef __EWOK_BITMAP_H__
  21#define __EWOK_BITMAP_H__
  22
  23#ifndef ewah_malloc
  24#       define ewah_malloc xmalloc
  25#endif
  26#ifndef ewah_realloc
  27#       define ewah_realloc xrealloc
  28#endif
  29#ifndef ewah_calloc
  30#       define ewah_calloc xcalloc
  31#endif
  32
  33struct strbuf;
  34typedef uint64_t eword_t;
  35#define BITS_IN_WORD (sizeof(eword_t) * 8)
  36
  37/**
  38 * Do not use __builtin_popcountll. The GCC implementation
  39 * is notoriously slow on all platforms.
  40 *
  41 * See: http://gcc.gnu.org/bugzilla/show_bug.cgi?id=36041
  42 */
  43static inline uint32_t ewah_bit_popcount64(uint64_t x)
  44{
  45        x = (x & 0x5555555555555555ULL) + ((x >>  1) & 0x5555555555555555ULL);
  46        x = (x & 0x3333333333333333ULL) + ((x >>  2) & 0x3333333333333333ULL);
  47        x = (x & 0x0F0F0F0F0F0F0F0FULL) + ((x >>  4) & 0x0F0F0F0F0F0F0F0FULL);
  48        return (x * 0x0101010101010101ULL) >> 56;
  49}
  50
  51/* __builtin_ctzll was not available until 3.4.0 */
  52#if defined(__GNUC__) && (__GNUC__ > 3 || (__GNUC__ == 3  && __GNUC_MINOR > 3))
  53#define ewah_bit_ctz64(x) __builtin_ctzll(x)
  54#else
  55static inline int ewah_bit_ctz64(uint64_t x)
  56{
  57        int n = 0;
  58        if ((x & 0xffffffff) == 0) { x >>= 32; n += 32; }
  59        if ((x &     0xffff) == 0) { x >>= 16; n += 16; }
  60        if ((x &       0xff) == 0) { x >>=  8; n +=  8; }
  61        if ((x &        0xf) == 0) { x >>=  4; n +=  4; }
  62        if ((x &        0x3) == 0) { x >>=  2; n +=  2; }
  63        if ((x &        0x1) == 0) { x >>=  1; n +=  1; }
  64        return n + !x;
  65}
  66#endif
  67
  68struct ewah_bitmap {
  69        eword_t *buffer;
  70        size_t buffer_size;
  71        size_t alloc_size;
  72        size_t bit_size;
  73        eword_t *rlw;
  74};
  75
  76typedef void (*ewah_callback)(size_t pos, void *);
  77
  78struct ewah_bitmap *ewah_pool_new(void);
  79void ewah_pool_free(struct ewah_bitmap *self);
  80
  81/**
  82 * Allocate a new EWAH Compressed bitmap
  83 */
  84struct ewah_bitmap *ewah_new(void);
  85
  86/**
  87 * Clear all the bits in the bitmap. Does not free or resize
  88 * memory.
  89 */
  90void ewah_clear(struct ewah_bitmap *self);
  91
  92/**
  93 * Free all the memory of the bitmap
  94 */
  95void ewah_free(struct ewah_bitmap *self);
  96
  97int ewah_serialize_to(struct ewah_bitmap *self,
  98                      int (*write_fun)(void *out, const void *buf, size_t len),
  99                      void *out);
 100int ewah_serialize(struct ewah_bitmap *self, int fd);
 101int ewah_serialize_native(struct ewah_bitmap *self, int fd);
 102int ewah_serialize_strbuf(struct ewah_bitmap *self, struct strbuf *);
 103
 104int ewah_deserialize(struct ewah_bitmap *self, int fd);
 105int ewah_read_mmap(struct ewah_bitmap *self, const void *map, size_t len);
 106
 107uint32_t ewah_checksum(struct ewah_bitmap *self);
 108
 109/**
 110 * Logical not (bitwise negation) in-place on the bitmap
 111 *
 112 * This operation is linear time based on the size of the bitmap.
 113 */
 114void ewah_not(struct ewah_bitmap *self);
 115
 116/**
 117 * Call the given callback with the position of every single bit
 118 * that has been set on the bitmap.
 119 *
 120 * This is an efficient operation that does not fully decompress
 121 * the bitmap.
 122 */
 123void ewah_each_bit(struct ewah_bitmap *self, ewah_callback callback, void *payload);
 124
 125/**
 126 * Set a given bit on the bitmap.
 127 *
 128 * The bit at position `pos` will be set to true. Because of the
 129 * way that the bitmap is compressed, a set bit cannot be unset
 130 * later on.
 131 *
 132 * Furthermore, since the bitmap uses streaming compression, bits
 133 * can only set incrementally.
 134 *
 135 * E.g.
 136 *              ewah_set(bitmap, 1); // ok
 137 *              ewah_set(bitmap, 76); // ok
 138 *              ewah_set(bitmap, 77); // ok
 139 *              ewah_set(bitmap, 8712800127); // ok
 140 *              ewah_set(bitmap, 25); // failed, assert raised
 141 */
 142void ewah_set(struct ewah_bitmap *self, size_t i);
 143
 144struct ewah_iterator {
 145        const eword_t *buffer;
 146        size_t buffer_size;
 147
 148        size_t pointer;
 149        eword_t compressed, literals;
 150        eword_t rl, lw;
 151        int b;
 152};
 153
 154/**
 155 * Initialize a new iterator to run through the bitmap in uncompressed form.
 156 *
 157 * The iterator can be stack allocated. The underlying bitmap must not be freed
 158 * before the iteration is over.
 159 *
 160 * E.g.
 161 *
 162 *              struct ewah_bitmap *bitmap = ewah_new();
 163 *              struct ewah_iterator it;
 164 *
 165 *              ewah_iterator_init(&it, bitmap);
 166 */
 167void ewah_iterator_init(struct ewah_iterator *it, struct ewah_bitmap *parent);
 168
 169/**
 170 * Yield every single word in the bitmap in uncompressed form. This is:
 171 * yield single words (32-64 bits) where each bit represents an actual
 172 * bit from the bitmap.
 173 *
 174 * Return: true if a word was yield, false if there are no words left
 175 */
 176int ewah_iterator_next(eword_t *next, struct ewah_iterator *it);
 177
 178void ewah_or(
 179        struct ewah_bitmap *ewah_i,
 180        struct ewah_bitmap *ewah_j,
 181        struct ewah_bitmap *out);
 182
 183void ewah_and_not(
 184        struct ewah_bitmap *ewah_i,
 185        struct ewah_bitmap *ewah_j,
 186        struct ewah_bitmap *out);
 187
 188void ewah_xor(
 189        struct ewah_bitmap *ewah_i,
 190        struct ewah_bitmap *ewah_j,
 191        struct ewah_bitmap *out);
 192
 193void ewah_and(
 194        struct ewah_bitmap *ewah_i,
 195        struct ewah_bitmap *ewah_j,
 196        struct ewah_bitmap *out);
 197
 198/**
 199 * Direct word access
 200 */
 201size_t ewah_add_empty_words(struct ewah_bitmap *self, int v, size_t number);
 202void ewah_add_dirty_words(
 203        struct ewah_bitmap *self, const eword_t *buffer, size_t number, int negate);
 204size_t ewah_add(struct ewah_bitmap *self, eword_t word);
 205
 206
 207/**
 208 * Uncompressed, old-school bitmap that can be efficiently compressed
 209 * into an `ewah_bitmap`.
 210 */
 211struct bitmap {
 212        eword_t *words;
 213        size_t word_alloc;
 214};
 215
 216struct bitmap *bitmap_new(void);
 217void bitmap_set(struct bitmap *self, size_t pos);
 218void bitmap_clear(struct bitmap *self, size_t pos);
 219int bitmap_get(struct bitmap *self, size_t pos);
 220void bitmap_reset(struct bitmap *self);
 221void bitmap_free(struct bitmap *self);
 222int bitmap_equals(struct bitmap *self, struct bitmap *other);
 223int bitmap_is_subset(struct bitmap *self, struct bitmap *super);
 224
 225struct ewah_bitmap * bitmap_to_ewah(struct bitmap *bitmap);
 226struct bitmap *ewah_to_bitmap(struct ewah_bitmap *ewah);
 227
 228void bitmap_and_not(struct bitmap *self, struct bitmap *other);
 229void bitmap_or_ewah(struct bitmap *self, struct ewah_bitmap *other);
 230void bitmap_or(struct bitmap *self, const struct bitmap *other);
 231
 232void bitmap_each_bit(struct bitmap *self, ewah_callback callback, void *data);
 233size_t bitmap_popcount(struct bitmap *self);
 234
 235#endif