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   1Git User's Manual (for version 1.5.1 or newer)
   2______________________________________________
   3
   4This manual is designed to be readable by someone with basic unix
   5command-line skills, but no previous knowledge of git.
   6
   7Chapter 1 gives a brief overview of git commands, without any
   8explanation; you may prefer to skip to chapter 2 on a first reading.
   9
  10Chapters 2 and 3 explain how to fetch and study a project using
  11git--the tools you'd need to build and test a particular version of a
  12software project, to search for regressions, and so on.
  13
  14Chapter 4 explains how to do development with git, and chapter 5 how
  15to share that development with others.
  16
  17Further chapters cover more specialized topics.
  18
  19Comprehensive reference documentation is available through the man
  20pages.  For a command such as "git clone", just use
  21
  22------------------------------------------------
  23$ man git-clone
  24------------------------------------------------
  25
  26[[git-quick-start]]
  27Git Quick Start
  28===============
  29
  30This is a quick summary of the major commands; the following chapters
  31will explain how these work in more detail.
  32
  33[[quick-creating-a-new-repository]]
  34Creating a new repository
  35-------------------------
  36
  37From a tarball:
  38
  39-----------------------------------------------
  40$ tar xzf project.tar.gz
  41$ cd project
  42$ git init
  43Initialized empty Git repository in .git/
  44$ git add .
  45$ git commit
  46-----------------------------------------------
  47
  48From a remote repository:
  49
  50-----------------------------------------------
  51$ git clone git://example.com/pub/project.git
  52$ cd project
  53-----------------------------------------------
  54
  55[[managing-branches]]
  56Managing branches
  57-----------------
  58
  59-----------------------------------------------
  60$ git branch         # list all local branches in this repo
  61$ git checkout test  # switch working directory to branch "test"
  62$ git branch new     # create branch "new" starting at current HEAD
  63$ git branch -d new  # delete branch "new"
  64-----------------------------------------------
  65
  66Instead of basing new branch on current HEAD (the default), use:
  67
  68-----------------------------------------------
  69$ git branch new test    # branch named "test"
  70$ git branch new v2.6.15 # tag named v2.6.15
  71$ git branch new HEAD^   # commit before the most recent
  72$ git branch new HEAD^^  # commit before that
  73$ git branch new test~10 # ten commits before tip of branch "test"
  74-----------------------------------------------
  75
  76Create and switch to a new branch at the same time:
  77
  78-----------------------------------------------
  79$ git checkout -b new v2.6.15
  80-----------------------------------------------
  81
  82Update and examine branches from the repository you cloned from:
  83
  84-----------------------------------------------
  85$ git fetch             # update
  86$ git branch -r         # list
  87  origin/master
  88  origin/next
  89  ...
  90$ git checkout -b masterwork origin/master
  91-----------------------------------------------
  92
  93Fetch a branch from a different repository, and give it a new
  94name in your repository:
  95
  96-----------------------------------------------
  97$ git fetch git://example.com/project.git theirbranch:mybranch
  98$ git fetch git://example.com/project.git v2.6.15:mybranch
  99-----------------------------------------------
 100
 101Keep a list of repositories you work with regularly:
 102
 103-----------------------------------------------
 104$ git remote add example git://example.com/project.git
 105$ git remote                    # list remote repositories
 106example
 107origin
 108$ git remote show example       # get details
 109* remote example
 110  URL: git://example.com/project.git
 111  Tracked remote branches
 112    master next ...
 113$ git fetch example             # update branches from example
 114$ git branch -r                 # list all remote branches
 115-----------------------------------------------
 116
 117
 118[[exploring-history]]
 119Exploring history
 120-----------------
 121
 122-----------------------------------------------
 123$ gitk                      # visualize and browse history
 124$ git log                   # list all commits
 125$ git log src/              # ...modifying src/
 126$ git log v2.6.15..v2.6.16  # ...in v2.6.16, not in v2.6.15
 127$ git log master..test      # ...in branch test, not in branch master
 128$ git log test..master      # ...in branch master, but not in test
 129$ git log test...master     # ...in one branch, not in both
 130$ git log -S'foo()'         # ...where difference contain "foo()"
 131$ git log --since="2 weeks ago"
 132$ git log -p                # show patches as well
 133$ git show                  # most recent commit
 134$ git diff v2.6.15..v2.6.16 # diff between two tagged versions
 135$ git diff v2.6.15..HEAD    # diff with current head
 136$ git grep "foo()"          # search working directory for "foo()"
 137$ git grep v2.6.15 "foo()"  # search old tree for "foo()"
 138$ git show v2.6.15:a.txt    # look at old version of a.txt
 139-----------------------------------------------
 140
 141Search for regressions:
 142
 143-----------------------------------------------
 144$ git bisect start
 145$ git bisect bad                # current version is bad
 146$ git bisect good v2.6.13-rc2   # last known good revision
 147Bisecting: 675 revisions left to test after this
 148                                # test here, then:
 149$ git bisect good               # if this revision is good, or
 150$ git bisect bad                # if this revision is bad.
 151                                # repeat until done.
 152-----------------------------------------------
 153
 154[[making-changes]]
 155Making changes
 156--------------
 157
 158Make sure git knows who to blame:
 159
 160------------------------------------------------
 161$ cat >>~/.gitconfig <<\EOF
 162[user]
 163        name = Your Name Comes Here
 164        email = you@yourdomain.example.com
 165EOF
 166------------------------------------------------
 167
 168Select file contents to include in the next commit, then make the
 169commit:
 170
 171-----------------------------------------------
 172$ git add a.txt    # updated file
 173$ git add b.txt    # new file
 174$ git rm c.txt     # old file
 175$ git commit
 176-----------------------------------------------
 177
 178Or, prepare and create the commit in one step:
 179
 180-----------------------------------------------
 181$ git commit d.txt # use latest content only of d.txt
 182$ git commit -a    # use latest content of all tracked files
 183-----------------------------------------------
 184
 185[[merging]]
 186Merging
 187-------
 188
 189-----------------------------------------------
 190$ git merge test   # merge branch "test" into the current branch
 191$ git pull git://example.com/project.git master
 192                   # fetch and merge in remote branch
 193$ git pull . test  # equivalent to git merge test
 194-----------------------------------------------
 195
 196[[sharing-your-changes]]
 197Sharing your changes
 198--------------------
 199
 200Importing or exporting patches:
 201
 202-----------------------------------------------
 203$ git format-patch origin..HEAD # format a patch for each commit
 204                                # in HEAD but not in origin
 205$ git am mbox # import patches from the mailbox "mbox"
 206-----------------------------------------------
 207
 208Fetch a branch in a different git repository, then merge into the
 209current branch:
 210
 211-----------------------------------------------
 212$ git pull git://example.com/project.git theirbranch
 213-----------------------------------------------
 214
 215Store the fetched branch into a local branch before merging into the
 216current branch:
 217
 218-----------------------------------------------
 219$ git pull git://example.com/project.git theirbranch:mybranch
 220-----------------------------------------------
 221
 222After creating commits on a local branch, update the remote
 223branch with your commits:
 224
 225-----------------------------------------------
 226$ git push ssh://example.com/project.git mybranch:theirbranch
 227-----------------------------------------------
 228
 229When remote and local branch are both named "test":
 230
 231-----------------------------------------------
 232$ git push ssh://example.com/project.git test
 233-----------------------------------------------
 234
 235Shortcut version for a frequently used remote repository:
 236
 237-----------------------------------------------
 238$ git remote add example ssh://example.com/project.git
 239$ git push example test
 240-----------------------------------------------
 241
 242[[repository-maintenance]]
 243Repository maintenance
 244----------------------
 245
 246Check for corruption:
 247
 248-----------------------------------------------
 249$ git fsck
 250-----------------------------------------------
 251
 252Recompress, remove unused cruft:
 253
 254-----------------------------------------------
 255$ git gc
 256-----------------------------------------------
 257
 258[[repositories-and-branches]]
 259Repositories and Branches
 260=========================
 261
 262[[how-to-get-a-git-repository]]
 263How to get a git repository
 264---------------------------
 265
 266It will be useful to have a git repository to experiment with as you
 267read this manual.
 268
 269The best way to get one is by using the gitlink:git-clone[1] command
 270to download a copy of an existing repository for a project that you
 271are interested in.  If you don't already have a project in mind, here
 272are some interesting examples:
 273
 274------------------------------------------------
 275        # git itself (approx. 10MB download):
 276$ git clone git://git.kernel.org/pub/scm/git/git.git
 277        # the linux kernel (approx. 150MB download):
 278$ git clone git://git.kernel.org/pub/scm/linux/kernel/git/torvalds/linux-2.6.git
 279------------------------------------------------
 280
 281The initial clone may be time-consuming for a large project, but you
 282will only need to clone once.
 283
 284The clone command creates a new directory named after the project
 285("git" or "linux-2.6" in the examples above).  After you cd into this
 286directory, you will see that it contains a copy of the project files,
 287together with a special top-level directory named ".git", which
 288contains all the information about the history of the project.
 289
 290In most of the following, examples will be taken from one of the two
 291repositories above.
 292
 293[[how-to-check-out]]
 294How to check out a different version of a project
 295-------------------------------------------------
 296
 297Git is best thought of as a tool for storing the history of a
 298collection of files.  It stores the history as a compressed
 299collection of interrelated snapshots (versions) of the project's
 300contents.
 301
 302A single git repository may contain multiple branches.  It keeps track
 303of them by keeping a list of <<def_head,heads>> which reference the
 304latest version on each branch; the gitlink:git-branch[1] command shows
 305you the list of branch heads:
 306
 307------------------------------------------------
 308$ git branch
 309* master
 310------------------------------------------------
 311
 312A freshly cloned repository contains a single branch head, by default
 313named "master", with the working directory initialized to the state of
 314the project referred to by that branch head.
 315
 316Most projects also use <<def_tag,tags>>.  Tags, like heads, are
 317references into the project's history, and can be listed using the
 318gitlink:git-tag[1] command:
 319
 320------------------------------------------------
 321$ git tag -l
 322v2.6.11
 323v2.6.11-tree
 324v2.6.12
 325v2.6.12-rc2
 326v2.6.12-rc3
 327v2.6.12-rc4
 328v2.6.12-rc5
 329v2.6.12-rc6
 330v2.6.13
 331...
 332------------------------------------------------
 333
 334Tags are expected to always point at the same version of a project,
 335while heads are expected to advance as development progresses.
 336
 337Create a new branch head pointing to one of these versions and check it
 338out using gitlink:git-checkout[1]:
 339
 340------------------------------------------------
 341$ git checkout -b new v2.6.13
 342------------------------------------------------
 343
 344The working directory then reflects the contents that the project had
 345when it was tagged v2.6.13, and gitlink:git-branch[1] shows two
 346branches, with an asterisk marking the currently checked-out branch:
 347
 348------------------------------------------------
 349$ git branch
 350  master
 351* new
 352------------------------------------------------
 353
 354If you decide that you'd rather see version 2.6.17, you can modify
 355the current branch to point at v2.6.17 instead, with
 356
 357------------------------------------------------
 358$ git reset --hard v2.6.17
 359------------------------------------------------
 360
 361Note that if the current branch head was your only reference to a
 362particular point in history, then resetting that branch may leave you
 363with no way to find the history it used to point to; so use this command
 364carefully.
 365
 366[[understanding-commits]]
 367Understanding History: Commits
 368------------------------------
 369
 370Every change in the history of a project is represented by a commit.
 371The gitlink:git-show[1] command shows the most recent commit on the
 372current branch:
 373
 374------------------------------------------------
 375$ git show
 376commit 2b5f6dcce5bf94b9b119e9ed8d537098ec61c3d2
 377Author: Jamal Hadi Salim <hadi@cyberus.ca>
 378Date:   Sat Dec 2 22:22:25 2006 -0800
 379
 380    [XFRM]: Fix aevent structuring to be more complete.
 381    
 382    aevents can not uniquely identify an SA. We break the ABI with this
 383    patch, but consensus is that since it is not yet utilized by any
 384    (known) application then it is fine (better do it now than later).
 385    
 386    Signed-off-by: Jamal Hadi Salim <hadi@cyberus.ca>
 387    Signed-off-by: David S. Miller <davem@davemloft.net>
 388
 389diff --git a/Documentation/networking/xfrm_sync.txt b/Documentation/networking/xfrm_sync.txt
 390index 8be626f..d7aac9d 100644
 391--- a/Documentation/networking/xfrm_sync.txt
 392+++ b/Documentation/networking/xfrm_sync.txt
 393@@ -47,10 +47,13 @@ aevent_id structure looks like:
 394 
 395    struct xfrm_aevent_id {
 396              struct xfrm_usersa_id           sa_id;
 397+             xfrm_address_t                  saddr;
 398              __u32                           flags;
 399+             __u32                           reqid;
 400    };
 401...
 402------------------------------------------------
 403
 404As you can see, a commit shows who made the latest change, what they
 405did, and why.
 406
 407Every commit has a 40-hexdigit id, sometimes called the "object name" or the
 408"SHA1 id", shown on the first line of the "git show" output.  You can usually
 409refer to a commit by a shorter name, such as a tag or a branch name, but this
 410longer name can also be useful.  Most importantly, it is a globally unique
 411name for this commit: so if you tell somebody else the object name (for
 412example in email), then you are guaranteed that name will refer to the same
 413commit in their repository that it does in yours (assuming their repository
 414has that commit at all).  Since the object name is computed as a hash over the
 415contents of the commit, you are guaranteed that the commit can never change
 416without its name also changing.
 417
 418In fact, in <<git-internals>> we shall see that everything stored in git
 419history, including file data and directory contents, is stored in an object
 420with a name that is a hash of its contents.
 421
 422[[understanding-reachability]]
 423Understanding history: commits, parents, and reachability
 424~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 425
 426Every commit (except the very first commit in a project) also has a
 427parent commit which shows what happened before this commit.
 428Following the chain of parents will eventually take you back to the
 429beginning of the project.
 430
 431However, the commits do not form a simple list; git allows lines of
 432development to diverge and then reconverge, and the point where two
 433lines of development reconverge is called a "merge".  The commit
 434representing a merge can therefore have more than one parent, with
 435each parent representing the most recent commit on one of the lines
 436of development leading to that point.
 437
 438The best way to see how this works is using the gitlink:gitk[1]
 439command; running gitk now on a git repository and looking for merge
 440commits will help understand how the git organizes history.
 441
 442In the following, we say that commit X is "reachable" from commit Y
 443if commit X is an ancestor of commit Y.  Equivalently, you could say
 444that Y is a descendent of X, or that there is a chain of parents
 445leading from commit Y to commit X.
 446
 447[[history-diagrams]]
 448Understanding history: History diagrams
 449~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 450
 451We will sometimes represent git history using diagrams like the one
 452below.  Commits are shown as "o", and the links between them with
 453lines drawn with - / and \.  Time goes left to right:
 454
 455
 456................................................
 457         o--o--o <-- Branch A
 458        /
 459 o--o--o <-- master
 460        \
 461         o--o--o <-- Branch B
 462................................................
 463
 464If we need to talk about a particular commit, the character "o" may
 465be replaced with another letter or number.
 466
 467[[what-is-a-branch]]
 468Understanding history: What is a branch?
 469~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 470
 471When we need to be precise, we will use the word "branch" to mean a line
 472of development, and "branch head" (or just "head") to mean a reference
 473to the most recent commit on a branch.  In the example above, the branch
 474head named "A" is a pointer to one particular commit, but we refer to
 475the line of three commits leading up to that point as all being part of
 476"branch A".
 477
 478However, when no confusion will result, we often just use the term
 479"branch" both for branches and for branch heads.
 480
 481[[manipulating-branches]]
 482Manipulating branches
 483---------------------
 484
 485Creating, deleting, and modifying branches is quick and easy; here's
 486a summary of the commands:
 487
 488git branch::
 489        list all branches
 490git branch <branch>::
 491        create a new branch named <branch>, referencing the same
 492        point in history as the current branch
 493git branch <branch> <start-point>::
 494        create a new branch named <branch>, referencing
 495        <start-point>, which may be specified any way you like,
 496        including using a branch name or a tag name
 497git branch -d <branch>::
 498        delete the branch <branch>; if the branch you are deleting
 499        points to a commit which is not reachable from the current
 500        branch, this command will fail with a warning.
 501git branch -D <branch>::
 502        even if the branch points to a commit not reachable
 503        from the current branch, you may know that that commit
 504        is still reachable from some other branch or tag.  In that
 505        case it is safe to use this command to force git to delete
 506        the branch.
 507git checkout <branch>::
 508        make the current branch <branch>, updating the working
 509        directory to reflect the version referenced by <branch>
 510git checkout -b <new> <start-point>::
 511        create a new branch <new> referencing <start-point>, and
 512        check it out.
 513
 514The special symbol "HEAD" can always be used to refer to the current
 515branch.  In fact, git uses a file named "HEAD" in the .git directory to
 516remember which branch is current:
 517
 518------------------------------------------------
 519$ cat .git/HEAD
 520ref: refs/heads/master
 521------------------------------------------------
 522
 523[[detached-head]]
 524Examining an old version without creating a new branch
 525------------------------------------------------------
 526
 527The git-checkout command normally expects a branch head, but will also
 528accept an arbitrary commit; for example, you can check out the commit
 529referenced by a tag:
 530
 531------------------------------------------------
 532$ git checkout v2.6.17
 533Note: moving to "v2.6.17" which isn't a local branch
 534If you want to create a new branch from this checkout, you may do so
 535(now or later) by using -b with the checkout command again. Example:
 536  git checkout -b <new_branch_name>
 537HEAD is now at 427abfa... Linux v2.6.17
 538------------------------------------------------
 539
 540The HEAD then refers to the SHA1 of the commit instead of to a branch,
 541and git branch shows that you are no longer on a branch:
 542
 543------------------------------------------------
 544$ cat .git/HEAD
 545427abfa28afedffadfca9dd8b067eb6d36bac53f
 546$ git branch
 547* (no branch)
 548  master
 549------------------------------------------------
 550
 551In this case we say that the HEAD is "detached".
 552
 553This is an easy way to check out a particular version without having to
 554make up a name for the new branch.   You can still create a new branch
 555(or tag) for this version later if you decide to.
 556
 557[[examining-remote-branches]]
 558Examining branches from a remote repository
 559-------------------------------------------
 560
 561The "master" branch that was created at the time you cloned is a copy
 562of the HEAD in the repository that you cloned from.  That repository
 563may also have had other branches, though, and your local repository
 564keeps branches which track each of those remote branches, which you
 565can view using the "-r" option to gitlink:git-branch[1]:
 566
 567------------------------------------------------
 568$ git branch -r
 569  origin/HEAD
 570  origin/html
 571  origin/maint
 572  origin/man
 573  origin/master
 574  origin/next
 575  origin/pu
 576  origin/todo
 577------------------------------------------------
 578
 579You cannot check out these remote-tracking branches, but you can
 580examine them on a branch of your own, just as you would a tag:
 581
 582------------------------------------------------
 583$ git checkout -b my-todo-copy origin/todo
 584------------------------------------------------
 585
 586Note that the name "origin" is just the name that git uses by default
 587to refer to the repository that you cloned from.
 588
 589[[how-git-stores-references]]
 590Naming branches, tags, and other references
 591-------------------------------------------
 592
 593Branches, remote-tracking branches, and tags are all references to
 594commits.  All references are named with a slash-separated path name
 595starting with "refs"; the names we've been using so far are actually
 596shorthand:
 597
 598        - The branch "test" is short for "refs/heads/test".
 599        - The tag "v2.6.18" is short for "refs/tags/v2.6.18".
 600        - "origin/master" is short for "refs/remotes/origin/master".
 601
 602The full name is occasionally useful if, for example, there ever
 603exists a tag and a branch with the same name.
 604
 605As another useful shortcut, the "HEAD" of a repository can be referred
 606to just using the name of that repository.  So, for example, "origin"
 607is usually a shortcut for the HEAD branch in the repository "origin".
 608
 609For the complete list of paths which git checks for references, and
 610the order it uses to decide which to choose when there are multiple
 611references with the same shorthand name, see the "SPECIFYING
 612REVISIONS" section of gitlink:git-rev-parse[1].
 613
 614[[Updating-a-repository-with-git-fetch]]
 615Updating a repository with git fetch
 616------------------------------------
 617
 618Eventually the developer cloned from will do additional work in her
 619repository, creating new commits and advancing the branches to point
 620at the new commits.
 621
 622The command "git fetch", with no arguments, will update all of the
 623remote-tracking branches to the latest version found in her
 624repository.  It will not touch any of your own branches--not even the
 625"master" branch that was created for you on clone.
 626
 627[[fetching-branches]]
 628Fetching branches from other repositories
 629-----------------------------------------
 630
 631You can also track branches from repositories other than the one you
 632cloned from, using gitlink:git-remote[1]:
 633
 634-------------------------------------------------
 635$ git remote add linux-nfs git://linux-nfs.org/pub/nfs-2.6.git
 636$ git fetch linux-nfs
 637* refs/remotes/linux-nfs/master: storing branch 'master' ...
 638  commit: bf81b46
 639-------------------------------------------------
 640
 641New remote-tracking branches will be stored under the shorthand name
 642that you gave "git remote add", in this case linux-nfs:
 643
 644-------------------------------------------------
 645$ git branch -r
 646linux-nfs/master
 647origin/master
 648-------------------------------------------------
 649
 650If you run "git fetch <remote>" later, the tracking branches for the
 651named <remote> will be updated.
 652
 653If you examine the file .git/config, you will see that git has added
 654a new stanza:
 655
 656-------------------------------------------------
 657$ cat .git/config
 658...
 659[remote "linux-nfs"]
 660        url = git://linux-nfs.org/pub/nfs-2.6.git
 661        fetch = +refs/heads/*:refs/remotes/linux-nfs/*
 662...
 663-------------------------------------------------
 664
 665This is what causes git to track the remote's branches; you may modify
 666or delete these configuration options by editing .git/config with a
 667text editor.  (See the "CONFIGURATION FILE" section of
 668gitlink:git-config[1] for details.)
 669
 670[[exploring-git-history]]
 671Exploring git history
 672=====================
 673
 674Git is best thought of as a tool for storing the history of a
 675collection of files.  It does this by storing compressed snapshots of
 676the contents of a file heirarchy, together with "commits" which show
 677the relationships between these snapshots.
 678
 679Git provides extremely flexible and fast tools for exploring the
 680history of a project.
 681
 682We start with one specialized tool that is useful for finding the
 683commit that introduced a bug into a project.
 684
 685[[using-bisect]]
 686How to use bisect to find a regression
 687--------------------------------------
 688
 689Suppose version 2.6.18 of your project worked, but the version at
 690"master" crashes.  Sometimes the best way to find the cause of such a
 691regression is to perform a brute-force search through the project's
 692history to find the particular commit that caused the problem.  The
 693gitlink:git-bisect[1] command can help you do this:
 694
 695-------------------------------------------------
 696$ git bisect start
 697$ git bisect good v2.6.18
 698$ git bisect bad master
 699Bisecting: 3537 revisions left to test after this
 700[65934a9a028b88e83e2b0f8b36618fe503349f8e] BLOCK: Make USB storage depend on SCSI rather than selecting it [try #6]
 701-------------------------------------------------
 702
 703If you run "git branch" at this point, you'll see that git has
 704temporarily moved you to a new branch named "bisect".  This branch
 705points to a commit (with commit id 65934...) that is reachable from
 706v2.6.19 but not from v2.6.18.  Compile and test it, and see whether
 707it crashes.  Assume it does crash.  Then:
 708
 709-------------------------------------------------
 710$ git bisect bad
 711Bisecting: 1769 revisions left to test after this
 712[7eff82c8b1511017ae605f0c99ac275a7e21b867] i2c-core: Drop useless bitmaskings
 713-------------------------------------------------
 714
 715checks out an older version.  Continue like this, telling git at each
 716stage whether the version it gives you is good or bad, and notice
 717that the number of revisions left to test is cut approximately in
 718half each time.
 719
 720After about 13 tests (in this case), it will output the commit id of
 721the guilty commit.  You can then examine the commit with
 722gitlink:git-show[1], find out who wrote it, and mail them your bug
 723report with the commit id.  Finally, run
 724
 725-------------------------------------------------
 726$ git bisect reset
 727-------------------------------------------------
 728
 729to return you to the branch you were on before and delete the
 730temporary "bisect" branch.
 731
 732Note that the version which git-bisect checks out for you at each
 733point is just a suggestion, and you're free to try a different
 734version if you think it would be a good idea.  For example,
 735occasionally you may land on a commit that broke something unrelated;
 736run
 737
 738-------------------------------------------------
 739$ git bisect visualize
 740-------------------------------------------------
 741
 742which will run gitk and label the commit it chose with a marker that
 743says "bisect".  Chose a safe-looking commit nearby, note its commit
 744id, and check it out with:
 745
 746-------------------------------------------------
 747$ git reset --hard fb47ddb2db...
 748-------------------------------------------------
 749
 750then test, run "bisect good" or "bisect bad" as appropriate, and
 751continue.
 752
 753[[naming-commits]]
 754Naming commits
 755--------------
 756
 757We have seen several ways of naming commits already:
 758
 759        - 40-hexdigit object name
 760        - branch name: refers to the commit at the head of the given
 761          branch
 762        - tag name: refers to the commit pointed to by the given tag
 763          (we've seen branches and tags are special cases of
 764          <<how-git-stores-references,references>>).
 765        - HEAD: refers to the head of the current branch
 766
 767There are many more; see the "SPECIFYING REVISIONS" section of the
 768gitlink:git-rev-parse[1] man page for the complete list of ways to
 769name revisions.  Some examples:
 770
 771-------------------------------------------------
 772$ git show fb47ddb2 # the first few characters of the object name
 773                    # are usually enough to specify it uniquely
 774$ git show HEAD^    # the parent of the HEAD commit
 775$ git show HEAD^^   # the grandparent
 776$ git show HEAD~4   # the great-great-grandparent
 777-------------------------------------------------
 778
 779Recall that merge commits may have more than one parent; by default,
 780^ and ~ follow the first parent listed in the commit, but you can
 781also choose:
 782
 783-------------------------------------------------
 784$ git show HEAD^1   # show the first parent of HEAD
 785$ git show HEAD^2   # show the second parent of HEAD
 786-------------------------------------------------
 787
 788In addition to HEAD, there are several other special names for
 789commits:
 790
 791Merges (to be discussed later), as well as operations such as
 792git-reset, which change the currently checked-out commit, generally
 793set ORIG_HEAD to the value HEAD had before the current operation.
 794
 795The git-fetch operation always stores the head of the last fetched
 796branch in FETCH_HEAD.  For example, if you run git fetch without
 797specifying a local branch as the target of the operation
 798
 799-------------------------------------------------
 800$ git fetch git://example.com/proj.git theirbranch
 801-------------------------------------------------
 802
 803the fetched commits will still be available from FETCH_HEAD.
 804
 805When we discuss merges we'll also see the special name MERGE_HEAD,
 806which refers to the other branch that we're merging in to the current
 807branch.
 808
 809The gitlink:git-rev-parse[1] command is a low-level command that is
 810occasionally useful for translating some name for a commit to the object
 811name for that commit:
 812
 813-------------------------------------------------
 814$ git rev-parse origin
 815e05db0fd4f31dde7005f075a84f96b360d05984b
 816-------------------------------------------------
 817
 818[[creating-tags]]
 819Creating tags
 820-------------
 821
 822We can also create a tag to refer to a particular commit; after
 823running
 824
 825-------------------------------------------------
 826$ git tag stable-1 1b2e1d63ff
 827-------------------------------------------------
 828
 829You can use stable-1 to refer to the commit 1b2e1d63ff.
 830
 831This creates a "lightweight" tag.  If you would also like to include a
 832comment with the tag, and possibly sign it cryptographically, then you
 833should create a tag object instead; see the gitlink:git-tag[1] man page
 834for details.
 835
 836[[browsing-revisions]]
 837Browsing revisions
 838------------------
 839
 840The gitlink:git-log[1] command can show lists of commits.  On its
 841own, it shows all commits reachable from the parent commit; but you
 842can also make more specific requests:
 843
 844-------------------------------------------------
 845$ git log v2.5..        # commits since (not reachable from) v2.5
 846$ git log test..master  # commits reachable from master but not test
 847$ git log master..test  # ...reachable from test but not master
 848$ git log master...test # ...reachable from either test or master,
 849                        #    but not both
 850$ git log --since="2 weeks ago" # commits from the last 2 weeks
 851$ git log Makefile      # commits which modify Makefile
 852$ git log fs/           # ... which modify any file under fs/
 853$ git log -S'foo()'     # commits which add or remove any file data
 854                        # matching the string 'foo()'
 855-------------------------------------------------
 856
 857And of course you can combine all of these; the following finds
 858commits since v2.5 which touch the Makefile or any file under fs:
 859
 860-------------------------------------------------
 861$ git log v2.5.. Makefile fs/
 862-------------------------------------------------
 863
 864You can also ask git log to show patches:
 865
 866-------------------------------------------------
 867$ git log -p
 868-------------------------------------------------
 869
 870See the "--pretty" option in the gitlink:git-log[1] man page for more
 871display options.
 872
 873Note that git log starts with the most recent commit and works
 874backwards through the parents; however, since git history can contain
 875multiple independent lines of development, the particular order that
 876commits are listed in may be somewhat arbitrary.
 877
 878[[generating-diffs]]
 879Generating diffs
 880----------------
 881
 882You can generate diffs between any two versions using
 883gitlink:git-diff[1]:
 884
 885-------------------------------------------------
 886$ git diff master..test
 887-------------------------------------------------
 888
 889Sometimes what you want instead is a set of patches:
 890
 891-------------------------------------------------
 892$ git format-patch master..test
 893-------------------------------------------------
 894
 895will generate a file with a patch for each commit reachable from test
 896but not from master.  Note that if master also has commits which are
 897not reachable from test, then the combined result of these patches
 898will not be the same as the diff produced by the git-diff example.
 899
 900[[viewing-old-file-versions]]
 901Viewing old file versions
 902-------------------------
 903
 904You can always view an old version of a file by just checking out the
 905correct revision first.  But sometimes it is more convenient to be
 906able to view an old version of a single file without checking
 907anything out; this command does that:
 908
 909-------------------------------------------------
 910$ git show v2.5:fs/locks.c
 911-------------------------------------------------
 912
 913Before the colon may be anything that names a commit, and after it
 914may be any path to a file tracked by git.
 915
 916[[history-examples]]
 917Examples
 918--------
 919
 920[[checking-for-equal-branches]]
 921Check whether two branches point at the same history
 922~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 923
 924Suppose you want to check whether two branches point at the same point
 925in history.
 926
 927-------------------------------------------------
 928$ git diff origin..master
 929-------------------------------------------------
 930
 931will tell you whether the contents of the project are the same at the
 932two branches; in theory, however, it's possible that the same project
 933contents could have been arrived at by two different historical
 934routes.  You could compare the object names:
 935
 936-------------------------------------------------
 937$ git rev-list origin
 938e05db0fd4f31dde7005f075a84f96b360d05984b
 939$ git rev-list master
 940e05db0fd4f31dde7005f075a84f96b360d05984b
 941-------------------------------------------------
 942
 943Or you could recall that the ... operator selects all commits
 944contained reachable from either one reference or the other but not
 945both: so
 946
 947-------------------------------------------------
 948$ git log origin...master
 949-------------------------------------------------
 950
 951will return no commits when the two branches are equal.
 952
 953[[finding-tagged-descendants]]
 954Find first tagged version including a given fix
 955~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 956
 957Suppose you know that the commit e05db0fd fixed a certain problem.
 958You'd like to find the earliest tagged release that contains that
 959fix.
 960
 961Of course, there may be more than one answer--if the history branched
 962after commit e05db0fd, then there could be multiple "earliest" tagged
 963releases.
 964
 965You could just visually inspect the commits since e05db0fd:
 966
 967-------------------------------------------------
 968$ gitk e05db0fd..
 969-------------------------------------------------
 970
 971Or you can use gitlink:git-name-rev[1], which will give the commit a
 972name based on any tag it finds pointing to one of the commit's
 973descendants:
 974
 975-------------------------------------------------
 976$ git name-rev --tags e05db0fd
 977e05db0fd tags/v1.5.0-rc1^0~23
 978-------------------------------------------------
 979
 980The gitlink:git-describe[1] command does the opposite, naming the
 981revision using a tag on which the given commit is based:
 982
 983-------------------------------------------------
 984$ git describe e05db0fd
 985v1.5.0-rc0-260-ge05db0f
 986-------------------------------------------------
 987
 988but that may sometimes help you guess which tags might come after the
 989given commit.
 990
 991If you just want to verify whether a given tagged version contains a
 992given commit, you could use gitlink:git-merge-base[1]:
 993
 994-------------------------------------------------
 995$ git merge-base e05db0fd v1.5.0-rc1
 996e05db0fd4f31dde7005f075a84f96b360d05984b
 997-------------------------------------------------
 998
 999The merge-base command finds a common ancestor of the given commits,
1000and always returns one or the other in the case where one is a
1001descendant of the other; so the above output shows that e05db0fd
1002actually is an ancestor of v1.5.0-rc1.
1003
1004Alternatively, note that
1005
1006-------------------------------------------------
1007$ git log v1.5.0-rc1..e05db0fd
1008-------------------------------------------------
1009
1010will produce empty output if and only if v1.5.0-rc1 includes e05db0fd,
1011because it outputs only commits that are not reachable from v1.5.0-rc1.
1012
1013As yet another alternative, the gitlink:git-show-branch[1] command lists
1014the commits reachable from its arguments with a display on the left-hand
1015side that indicates which arguments that commit is reachable from.  So,
1016you can run something like
1017
1018-------------------------------------------------
1019$ git show-branch e05db0fd v1.5.0-rc0 v1.5.0-rc1 v1.5.0-rc2
1020! [e05db0fd] Fix warnings in sha1_file.c - use C99 printf format if
1021available
1022 ! [v1.5.0-rc0] GIT v1.5.0 preview
1023  ! [v1.5.0-rc1] GIT v1.5.0-rc1
1024   ! [v1.5.0-rc2] GIT v1.5.0-rc2
1025...
1026-------------------------------------------------
1027
1028then search for a line that looks like
1029
1030-------------------------------------------------
1031+ ++ [e05db0fd] Fix warnings in sha1_file.c - use C99 printf format if
1032available
1033-------------------------------------------------
1034
1035Which shows that e05db0fd is reachable from itself, from v1.5.0-rc1, and
1036from v1.5.0-rc2, but not from v1.5.0-rc0.
1037
1038
1039[[Developing-with-git]]
1040Developing with git
1041===================
1042
1043[[telling-git-your-name]]
1044Telling git your name
1045---------------------
1046
1047Before creating any commits, you should introduce yourself to git.  The
1048easiest way to do so is to make sure the following lines appear in a
1049file named .gitconfig in your home directory:
1050
1051------------------------------------------------
1052[user]
1053        name = Your Name Comes Here
1054        email = you@yourdomain.example.com
1055------------------------------------------------
1056
1057(See the "CONFIGURATION FILE" section of gitlink:git-config[1] for
1058details on the configuration file.)
1059
1060
1061[[creating-a-new-repository]]
1062Creating a new repository
1063-------------------------
1064
1065Creating a new repository from scratch is very easy:
1066
1067-------------------------------------------------
1068$ mkdir project
1069$ cd project
1070$ git init
1071-------------------------------------------------
1072
1073If you have some initial content (say, a tarball):
1074
1075-------------------------------------------------
1076$ tar -xzvf project.tar.gz
1077$ cd project
1078$ git init
1079$ git add . # include everything below ./ in the first commit:
1080$ git commit
1081-------------------------------------------------
1082
1083[[how-to-make-a-commit]]
1084How to make a commit
1085--------------------
1086
1087Creating a new commit takes three steps:
1088
1089        1. Making some changes to the working directory using your
1090           favorite editor.
1091        2. Telling git about your changes.
1092        3. Creating the commit using the content you told git about
1093           in step 2.
1094
1095In practice, you can interleave and repeat steps 1 and 2 as many
1096times as you want: in order to keep track of what you want committed
1097at step 3, git maintains a snapshot of the tree's contents in a
1098special staging area called "the index."
1099
1100At the beginning, the content of the index will be identical to
1101that of the HEAD.  The command "git diff --cached", which shows
1102the difference between the HEAD and the index, should therefore
1103produce no output at that point.
1104
1105Modifying the index is easy:
1106
1107To update the index with the new contents of a modified file, use
1108
1109-------------------------------------------------
1110$ git add path/to/file
1111-------------------------------------------------
1112
1113To add the contents of a new file to the index, use
1114
1115-------------------------------------------------
1116$ git add path/to/file
1117-------------------------------------------------
1118
1119To remove a file from the index and from the working tree,
1120
1121-------------------------------------------------
1122$ git rm path/to/file
1123-------------------------------------------------
1124
1125After each step you can verify that
1126
1127-------------------------------------------------
1128$ git diff --cached
1129-------------------------------------------------
1130
1131always shows the difference between the HEAD and the index file--this
1132is what you'd commit if you created the commit now--and that
1133
1134-------------------------------------------------
1135$ git diff
1136-------------------------------------------------
1137
1138shows the difference between the working tree and the index file.
1139
1140Note that "git add" always adds just the current contents of a file
1141to the index; further changes to the same file will be ignored unless
1142you run git-add on the file again.
1143
1144When you're ready, just run
1145
1146-------------------------------------------------
1147$ git commit
1148-------------------------------------------------
1149
1150and git will prompt you for a commit message and then create the new
1151commit.  Check to make sure it looks like what you expected with
1152
1153-------------------------------------------------
1154$ git show
1155-------------------------------------------------
1156
1157As a special shortcut,
1158                
1159-------------------------------------------------
1160$ git commit -a
1161-------------------------------------------------
1162
1163will update the index with any files that you've modified or removed
1164and create a commit, all in one step.
1165
1166A number of commands are useful for keeping track of what you're
1167about to commit:
1168
1169-------------------------------------------------
1170$ git diff --cached # difference between HEAD and the index; what
1171                    # would be commited if you ran "commit" now.
1172$ git diff          # difference between the index file and your
1173                    # working directory; changes that would not
1174                    # be included if you ran "commit" now.
1175$ git diff HEAD     # difference between HEAD and working tree; what
1176                    # would be committed if you ran "commit -a" now.
1177$ git status        # a brief per-file summary of the above.
1178-------------------------------------------------
1179
1180[[creating-good-commit-messages]]
1181Creating good commit messages
1182-----------------------------
1183
1184Though not required, it's a good idea to begin the commit message
1185with a single short (less than 50 character) line summarizing the
1186change, followed by a blank line and then a more thorough
1187description.  Tools that turn commits into email, for example, use
1188the first line on the Subject line and the rest of the commit in the
1189body.
1190
1191[[how-to-merge]]
1192How to merge
1193------------
1194
1195You can rejoin two diverging branches of development using
1196gitlink:git-merge[1]:
1197
1198-------------------------------------------------
1199$ git merge branchname
1200-------------------------------------------------
1201
1202merges the development in the branch "branchname" into the current
1203branch.  If there are conflicts--for example, if the same file is
1204modified in two different ways in the remote branch and the local
1205branch--then you are warned; the output may look something like this:
1206
1207-------------------------------------------------
1208$ git merge next
1209 100% (4/4) done
1210Auto-merged file.txt
1211CONFLICT (content): Merge conflict in file.txt
1212Automatic merge failed; fix conflicts and then commit the result.
1213-------------------------------------------------
1214
1215Conflict markers are left in the problematic files, and after
1216you resolve the conflicts manually, you can update the index
1217with the contents and run git commit, as you normally would when
1218creating a new file.
1219
1220If you examine the resulting commit using gitk, you will see that it
1221has two parents, one pointing to the top of the current branch, and
1222one to the top of the other branch.
1223
1224[[resolving-a-merge]]
1225Resolving a merge
1226-----------------
1227
1228When a merge isn't resolved automatically, git leaves the index and
1229the working tree in a special state that gives you all the
1230information you need to help resolve the merge.
1231
1232Files with conflicts are marked specially in the index, so until you
1233resolve the problem and update the index, gitlink:git-commit[1] will
1234fail:
1235
1236-------------------------------------------------
1237$ git commit
1238file.txt: needs merge
1239-------------------------------------------------
1240
1241Also, gitlink:git-status[1] will list those files as "unmerged", and the
1242files with conflicts will have conflict markers added, like this:
1243
1244-------------------------------------------------
1245<<<<<<< HEAD:file.txt
1246Hello world
1247=======
1248Goodbye
1249>>>>>>> 77976da35a11db4580b80ae27e8d65caf5208086:file.txt
1250-------------------------------------------------
1251
1252All you need to do is edit the files to resolve the conflicts, and then
1253
1254-------------------------------------------------
1255$ git add file.txt
1256$ git commit
1257-------------------------------------------------
1258
1259Note that the commit message will already be filled in for you with
1260some information about the merge.  Normally you can just use this
1261default message unchanged, but you may add additional commentary of
1262your own if desired.
1263
1264The above is all you need to know to resolve a simple merge.  But git
1265also provides more information to help resolve conflicts:
1266
1267[[conflict-resolution]]
1268Getting conflict-resolution help during a merge
1269~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1270
1271All of the changes that git was able to merge automatically are
1272already added to the index file, so gitlink:git-diff[1] shows only
1273the conflicts.  It uses an unusual syntax:
1274
1275-------------------------------------------------
1276$ git diff
1277diff --cc file.txt
1278index 802992c,2b60207..0000000
1279--- a/file.txt
1280+++ b/file.txt
1281@@@ -1,1 -1,1 +1,5 @@@
1282++<<<<<<< HEAD:file.txt
1283 +Hello world
1284++=======
1285+ Goodbye
1286++>>>>>>> 77976da35a11db4580b80ae27e8d65caf5208086:file.txt
1287-------------------------------------------------
1288
1289Recall that the commit which will be commited after we resolve this
1290conflict will have two parents instead of the usual one: one parent
1291will be HEAD, the tip of the current branch; the other will be the
1292tip of the other branch, which is stored temporarily in MERGE_HEAD.
1293
1294During the merge, the index holds three versions of each file.  Each of
1295these three "file stages" represents a different version of the file:
1296
1297-------------------------------------------------
1298$ git show :1:file.txt  # the file in a common ancestor of both branches
1299$ git show :2:file.txt  # the version from HEAD, but including any
1300                        # nonconflicting changes from MERGE_HEAD
1301$ git show :3:file.txt  # the version from MERGE_HEAD, but including any
1302                        # nonconflicting changes from HEAD.
1303-------------------------------------------------
1304
1305Since the stage 2 and stage 3 versions have already been updated with
1306nonconflicting changes, the only remaining differences between them are
1307the important ones; thus gitlink:git-diff[1] can use the information in
1308the index to show only those conflicts.
1309
1310The diff above shows the differences between the working-tree version of
1311file.txt and the stage 2 and stage 3 versions.  So instead of preceding
1312each line by a single "+" or "-", it now uses two columns: the first
1313column is used for differences between the first parent and the working
1314directory copy, and the second for differences between the second parent
1315and the working directory copy.  (See the "COMBINED DIFF FORMAT" section
1316of gitlink:git-diff-files[1] for a details of the format.)
1317
1318After resolving the conflict in the obvious way (but before updating the
1319index), the diff will look like:
1320
1321-------------------------------------------------
1322$ git diff
1323diff --cc file.txt
1324index 802992c,2b60207..0000000
1325--- a/file.txt
1326+++ b/file.txt
1327@@@ -1,1 -1,1 +1,1 @@@
1328- Hello world
1329 -Goodbye
1330++Goodbye world
1331-------------------------------------------------
1332
1333This shows that our resolved version deleted "Hello world" from the
1334first parent, deleted "Goodbye" from the second parent, and added
1335"Goodbye world", which was previously absent from both.
1336
1337Some special diff options allow diffing the working directory against
1338any of these stages:
1339
1340-------------------------------------------------
1341$ git diff -1 file.txt          # diff against stage 1
1342$ git diff --base file.txt      # same as the above
1343$ git diff -2 file.txt          # diff against stage 2
1344$ git diff --ours file.txt      # same as the above
1345$ git diff -3 file.txt          # diff against stage 3
1346$ git diff --theirs file.txt    # same as the above.
1347-------------------------------------------------
1348
1349The gitlink:git-log[1] and gitk[1] commands also provide special help
1350for merges:
1351
1352-------------------------------------------------
1353$ git log --merge
1354$ gitk --merge
1355-------------------------------------------------
1356
1357These will display all commits which exist only on HEAD or on
1358MERGE_HEAD, and which touch an unmerged file.
1359
1360You may also use gitlink:git-mergetool[1], which lets you merge the
1361unmerged files using external tools such as emacs or kdiff3.
1362
1363Each time you resolve the conflicts in a file and update the index:
1364
1365-------------------------------------------------
1366$ git add file.txt
1367-------------------------------------------------
1368
1369the different stages of that file will be "collapsed", after which
1370git-diff will (by default) no longer show diffs for that file.
1371
1372[[undoing-a-merge]]
1373Undoing a merge
1374---------------
1375
1376If you get stuck and decide to just give up and throw the whole mess
1377away, you can always return to the pre-merge state with
1378
1379-------------------------------------------------
1380$ git reset --hard HEAD
1381-------------------------------------------------
1382
1383Or, if you've already commited the merge that you want to throw away,
1384
1385-------------------------------------------------
1386$ git reset --hard ORIG_HEAD
1387-------------------------------------------------
1388
1389However, this last command can be dangerous in some cases--never
1390throw away a commit you have already committed if that commit may
1391itself have been merged into another branch, as doing so may confuse
1392further merges.
1393
1394[[fast-forwards]]
1395Fast-forward merges
1396-------------------
1397
1398There is one special case not mentioned above, which is treated
1399differently.  Normally, a merge results in a merge commit, with two
1400parents, one pointing at each of the two lines of development that
1401were merged.
1402
1403However, if the current branch is a descendant of the other--so every
1404commit present in the one is already contained in the other--then git
1405just performs a "fast forward"; the head of the current branch is moved
1406forward to point at the head of the merged-in branch, without any new
1407commits being created.
1408
1409[[fixing-mistakes]]
1410Fixing mistakes
1411---------------
1412
1413If you've messed up the working tree, but haven't yet committed your
1414mistake, you can return the entire working tree to the last committed
1415state with
1416
1417-------------------------------------------------
1418$ git reset --hard HEAD
1419-------------------------------------------------
1420
1421If you make a commit that you later wish you hadn't, there are two
1422fundamentally different ways to fix the problem:
1423
1424        1. You can create a new commit that undoes whatever was done
1425        by the previous commit.  This is the correct thing if your
1426        mistake has already been made public.
1427
1428        2. You can go back and modify the old commit.  You should
1429        never do this if you have already made the history public;
1430        git does not normally expect the "history" of a project to
1431        change, and cannot correctly perform repeated merges from
1432        a branch that has had its history changed.
1433
1434[[reverting-a-commit]]
1435Fixing a mistake with a new commit
1436~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1437
1438Creating a new commit that reverts an earlier change is very easy;
1439just pass the gitlink:git-revert[1] command a reference to the bad
1440commit; for example, to revert the most recent commit:
1441
1442-------------------------------------------------
1443$ git revert HEAD
1444-------------------------------------------------
1445
1446This will create a new commit which undoes the change in HEAD.  You
1447will be given a chance to edit the commit message for the new commit.
1448
1449You can also revert an earlier change, for example, the next-to-last:
1450
1451-------------------------------------------------
1452$ git revert HEAD^
1453-------------------------------------------------
1454
1455In this case git will attempt to undo the old change while leaving
1456intact any changes made since then.  If more recent changes overlap
1457with the changes to be reverted, then you will be asked to fix
1458conflicts manually, just as in the case of <<resolving-a-merge,
1459resolving a merge>>.
1460
1461[[fixing-a-mistake-by-editing-history]]
1462Fixing a mistake by editing history
1463~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1464
1465If the problematic commit is the most recent commit, and you have not
1466yet made that commit public, then you may just
1467<<undoing-a-merge,destroy it using git-reset>>.
1468
1469Alternatively, you
1470can edit the working directory and update the index to fix your
1471mistake, just as if you were going to <<how-to-make-a-commit,create a
1472new commit>>, then run
1473
1474-------------------------------------------------
1475$ git commit --amend
1476-------------------------------------------------
1477
1478which will replace the old commit by a new commit incorporating your
1479changes, giving you a chance to edit the old commit message first.
1480
1481Again, you should never do this to a commit that may already have
1482been merged into another branch; use gitlink:git-revert[1] instead in
1483that case.
1484
1485It is also possible to edit commits further back in the history, but
1486this is an advanced topic to be left for
1487<<cleaning-up-history,another chapter>>.
1488
1489[[checkout-of-path]]
1490Checking out an old version of a file
1491~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1492
1493In the process of undoing a previous bad change, you may find it
1494useful to check out an older version of a particular file using
1495gitlink:git-checkout[1].  We've used git checkout before to switch
1496branches, but it has quite different behavior if it is given a path
1497name: the command
1498
1499-------------------------------------------------
1500$ git checkout HEAD^ path/to/file
1501-------------------------------------------------
1502
1503replaces path/to/file by the contents it had in the commit HEAD^, and
1504also updates the index to match.  It does not change branches.
1505
1506If you just want to look at an old version of the file, without
1507modifying the working directory, you can do that with
1508gitlink:git-show[1]:
1509
1510-------------------------------------------------
1511$ git show HEAD^:path/to/file
1512-------------------------------------------------
1513
1514which will display the given version of the file.
1515
1516[[ensuring-good-performance]]
1517Ensuring good performance
1518-------------------------
1519
1520On large repositories, git depends on compression to keep the history
1521information from taking up to much space on disk or in memory.
1522
1523This compression is not performed automatically.  Therefore you
1524should occasionally run gitlink:git-gc[1]:
1525
1526-------------------------------------------------
1527$ git gc
1528-------------------------------------------------
1529
1530to recompress the archive.  This can be very time-consuming, so
1531you may prefer to run git-gc when you are not doing other work.
1532
1533
1534[[ensuring-reliability]]
1535Ensuring reliability
1536--------------------
1537
1538[[checking-for-corruption]]
1539Checking the repository for corruption
1540~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1541
1542The gitlink:git-fsck[1] command runs a number of self-consistency checks
1543on the repository, and reports on any problems.  This may take some
1544time.  The most common warning by far is about "dangling" objects:
1545
1546-------------------------------------------------
1547$ git fsck
1548dangling commit 7281251ddd2a61e38657c827739c57015671a6b3
1549dangling commit 2706a059f258c6b245f298dc4ff2ccd30ec21a63
1550dangling commit 13472b7c4b80851a1bc551779171dcb03655e9b5
1551dangling blob 218761f9d90712d37a9c5e36f406f92202db07eb
1552dangling commit bf093535a34a4d35731aa2bd90fe6b176302f14f
1553dangling commit 8e4bec7f2ddaa268bef999853c25755452100f8e
1554dangling tree d50bb86186bf27b681d25af89d3b5b68382e4085
1555dangling tree b24c2473f1fd3d91352a624795be026d64c8841f
1556...
1557-------------------------------------------------
1558
1559Dangling objects are not a problem.  At worst they may take up a little
1560extra disk space.  They can sometimes provide a last-resort method of
1561recovery lost work--see <<dangling-objects>> for details.  However, if
1562you want, you may remove them with gitlink:git-prune[1] or the --prune
1563option to gitlink:git-gc[1]:
1564
1565-------------------------------------------------
1566$ git gc --prune
1567-------------------------------------------------
1568
1569This may be time-consuming.  Unlike most other git operations (including
1570git-gc when run without any options), it is not safe to prune while
1571other git operations are in progress in the same repository.
1572
1573[[recovering-lost-changes]]
1574Recovering lost changes
1575~~~~~~~~~~~~~~~~~~~~~~~
1576
1577[[reflogs]]
1578Reflogs
1579^^^^^^^
1580
1581Say you modify a branch with gitlink:git-reset[1] --hard, and then
1582realize that the branch was the only reference you had to that point in
1583history.
1584
1585Fortunately, git also keeps a log, called a "reflog", of all the
1586previous values of each branch.  So in this case you can still find the
1587old history using, for example, 
1588
1589-------------------------------------------------
1590$ git log master@{1}
1591-------------------------------------------------
1592
1593This lists the commits reachable from the previous version of the head.
1594This syntax can be used to with any git command that accepts a commit,
1595not just with git log.  Some other examples:
1596
1597-------------------------------------------------
1598$ git show master@{2}           # See where the branch pointed 2,
1599$ git show master@{3}           # 3, ... changes ago.
1600$ gitk master@{yesterday}       # See where it pointed yesterday,
1601$ gitk master@{"1 week ago"}    # ... or last week
1602$ git log --walk-reflogs master # show reflog entries for master
1603-------------------------------------------------
1604
1605A separate reflog is kept for the HEAD, so
1606
1607-------------------------------------------------
1608$ git show HEAD@{"1 week ago"}
1609-------------------------------------------------
1610
1611will show what HEAD pointed to one week ago, not what the current branch
1612pointed to one week ago.  This allows you to see the history of what
1613you've checked out.
1614
1615The reflogs are kept by default for 30 days, after which they may be
1616pruned.  See gitlink:git-reflog[1] and gitlink:git-gc[1] to learn
1617how to control this pruning, and see the "SPECIFYING REVISIONS"
1618section of gitlink:git-rev-parse[1] for details.
1619
1620Note that the reflog history is very different from normal git history.
1621While normal history is shared by every repository that works on the
1622same project, the reflog history is not shared: it tells you only about
1623how the branches in your local repository have changed over time.
1624
1625[[dangling-object-recovery]]
1626Examining dangling objects
1627^^^^^^^^^^^^^^^^^^^^^^^^^^
1628
1629In some situations the reflog may not be able to save you.  For example,
1630suppose you delete a branch, then realize you need the history it
1631contained.  The reflog is also deleted; however, if you have not yet
1632pruned the repository, then you may still be able to find the lost
1633commits in the dangling objects that git-fsck reports.  See
1634<<dangling-objects>> for the details.
1635
1636-------------------------------------------------
1637$ git fsck
1638dangling commit 7281251ddd2a61e38657c827739c57015671a6b3
1639dangling commit 2706a059f258c6b245f298dc4ff2ccd30ec21a63
1640dangling commit 13472b7c4b80851a1bc551779171dcb03655e9b5
1641...
1642-------------------------------------------------
1643
1644You can examine
1645one of those dangling commits with, for example,
1646
1647------------------------------------------------
1648$ gitk 7281251ddd --not --all
1649------------------------------------------------
1650
1651which does what it sounds like: it says that you want to see the commit
1652history that is described by the dangling commit(s), but not the
1653history that is described by all your existing branches and tags.  Thus
1654you get exactly the history reachable from that commit that is lost.
1655(And notice that it might not be just one commit: we only report the
1656"tip of the line" as being dangling, but there might be a whole deep
1657and complex commit history that was dropped.)
1658
1659If you decide you want the history back, you can always create a new
1660reference pointing to it, for example, a new branch:
1661
1662------------------------------------------------
1663$ git branch recovered-branch 7281251ddd 
1664------------------------------------------------
1665
1666Other types of dangling objects (blobs and trees) are also possible, and
1667dangling objects can arise in other situations.
1668
1669
1670[[sharing-development]]
1671Sharing development with others
1672===============================
1673
1674[[getting-updates-with-git-pull]]
1675Getting updates with git pull
1676-----------------------------
1677
1678After you clone a repository and make a few changes of your own, you
1679may wish to check the original repository for updates and merge them
1680into your own work.
1681
1682We have already seen <<Updating-a-repository-with-git-fetch,how to
1683keep remote tracking branches up to date>> with gitlink:git-fetch[1],
1684and how to merge two branches.  So you can merge in changes from the
1685original repository's master branch with:
1686
1687-------------------------------------------------
1688$ git fetch
1689$ git merge origin/master
1690-------------------------------------------------
1691
1692However, the gitlink:git-pull[1] command provides a way to do this in
1693one step:
1694
1695-------------------------------------------------
1696$ git pull origin master
1697-------------------------------------------------
1698
1699In fact, "origin" is normally the default repository to pull from,
1700and the default branch is normally the HEAD of the remote repository,
1701so often you can accomplish the above with just
1702
1703-------------------------------------------------
1704$ git pull
1705-------------------------------------------------
1706
1707See the descriptions of the branch.<name>.remote and branch.<name>.merge
1708options in gitlink:git-config[1] to learn how to control these defaults
1709depending on the current branch.  Also note that the --track option to
1710gitlink:git-branch[1] and gitlink:git-checkout[1] can be used to
1711automatically set the default remote branch to pull from at the time
1712that a branch is created:
1713
1714-------------------------------------------------
1715$ git checkout --track -b origin/maint maint
1716-------------------------------------------------
1717
1718In addition to saving you keystrokes, "git pull" also helps you by
1719producing a default commit message documenting the branch and
1720repository that you pulled from.
1721
1722(But note that no such commit will be created in the case of a
1723<<fast-forwards,fast forward>>; instead, your branch will just be
1724updated to point to the latest commit from the upstream branch.)
1725
1726The git-pull command can also be given "." as the "remote" repository,
1727in which case it just merges in a branch from the current repository; so
1728the commands
1729
1730-------------------------------------------------
1731$ git pull . branch
1732$ git merge branch
1733-------------------------------------------------
1734
1735are roughly equivalent.  The former is actually very commonly used.
1736
1737[[submitting-patches]]
1738Submitting patches to a project
1739-------------------------------
1740
1741If you just have a few changes, the simplest way to submit them may
1742just be to send them as patches in email:
1743
1744First, use gitlink:git-format-patch[1]; for example:
1745
1746-------------------------------------------------
1747$ git format-patch origin
1748-------------------------------------------------
1749
1750will produce a numbered series of files in the current directory, one
1751for each patch in the current branch but not in origin/HEAD.
1752
1753You can then import these into your mail client and send them by
1754hand.  However, if you have a lot to send at once, you may prefer to
1755use the gitlink:git-send-email[1] script to automate the process.
1756Consult the mailing list for your project first to determine how they
1757prefer such patches be handled.
1758
1759[[importing-patches]]
1760Importing patches to a project
1761------------------------------
1762
1763Git also provides a tool called gitlink:git-am[1] (am stands for
1764"apply mailbox"), for importing such an emailed series of patches.
1765Just save all of the patch-containing messages, in order, into a
1766single mailbox file, say "patches.mbox", then run
1767
1768-------------------------------------------------
1769$ git am -3 patches.mbox
1770-------------------------------------------------
1771
1772Git will apply each patch in order; if any conflicts are found, it
1773will stop, and you can fix the conflicts as described in
1774"<<resolving-a-merge,Resolving a merge>>".  (The "-3" option tells
1775git to perform a merge; if you would prefer it just to abort and
1776leave your tree and index untouched, you may omit that option.)
1777
1778Once the index is updated with the results of the conflict
1779resolution, instead of creating a new commit, just run
1780
1781-------------------------------------------------
1782$ git am --resolved
1783-------------------------------------------------
1784
1785and git will create the commit for you and continue applying the
1786remaining patches from the mailbox.
1787
1788The final result will be a series of commits, one for each patch in
1789the original mailbox, with authorship and commit log message each
1790taken from the message containing each patch.
1791
1792[[setting-up-a-public-repository]]
1793Setting up a public repository
1794------------------------------
1795
1796Another way to submit changes to a project is to simply tell the
1797maintainer of that project to pull from your repository, exactly as
1798you did in the section "<<getting-updates-with-git-pull, Getting
1799updates with git pull>>".
1800
1801If you and maintainer both have accounts on the same machine, then
1802then you can just pull changes from each other's repositories
1803directly; note that all of the commands (gitlink:git-clone[1],
1804git-fetch[1], git-pull[1], etc.) that accept a URL as an argument
1805will also accept a local directory name; so, for example, you can
1806use
1807
1808-------------------------------------------------
1809$ git clone /path/to/repository
1810$ git pull /path/to/other/repository
1811-------------------------------------------------
1812
1813If this sort of setup is inconvenient or impossible, another (more
1814common) option is to set up a public repository on a public server.
1815This also allows you to cleanly separate private work in progress
1816from publicly visible work.
1817
1818You will continue to do your day-to-day work in your personal
1819repository, but periodically "push" changes from your personal
1820repository into your public repository, allowing other developers to
1821pull from that repository.  So the flow of changes, in a situation
1822where there is one other developer with a public repository, looks
1823like this:
1824
1825                        you push
1826  your personal repo ------------------> your public repo
1827        ^                                     |
1828        |                                     |
1829        | you pull                            | they pull
1830        |                                     |
1831        |                                     |
1832        |               they push             V
1833  their public repo <------------------- their repo
1834
1835Now, assume your personal repository is in the directory ~/proj.  We
1836first create a new clone of the repository:
1837
1838-------------------------------------------------
1839$ git clone --bare ~/proj proj.git
1840-------------------------------------------------
1841
1842The resulting directory proj.git contains a "bare" git repository--it is
1843just the contents of the ".git" directory, without a checked-out copy of
1844a working directory.
1845
1846Next, copy proj.git to the server where you plan to host the
1847public repository.  You can use scp, rsync, or whatever is most
1848convenient.
1849
1850If somebody else maintains the public server, they may already have
1851set up a git service for you, and you may skip to the section
1852"<<pushing-changes-to-a-public-repository,Pushing changes to a public
1853repository>>", below.
1854
1855Otherwise, the following sections explain how to export your newly
1856created public repository:
1857
1858[[exporting-via-http]]
1859Exporting a git repository via http
1860-----------------------------------
1861
1862The git protocol gives better performance and reliability, but on a
1863host with a web server set up, http exports may be simpler to set up.
1864
1865All you need to do is place the newly created bare git repository in
1866a directory that is exported by the web server, and make some
1867adjustments to give web clients some extra information they need:
1868
1869-------------------------------------------------
1870$ mv proj.git /home/you/public_html/proj.git
1871$ cd proj.git
1872$ git --bare update-server-info
1873$ chmod a+x hooks/post-update
1874-------------------------------------------------
1875
1876(For an explanation of the last two lines, see
1877gitlink:git-update-server-info[1], and the documentation
1878link:hooks.txt[Hooks used by git].)
1879
1880Advertise the url of proj.git.  Anybody else should then be able to
1881clone or pull from that url, for example with a commandline like:
1882
1883-------------------------------------------------
1884$ git clone http://yourserver.com/~you/proj.git
1885-------------------------------------------------
1886
1887(See also
1888link:howto/setup-git-server-over-http.txt[setup-git-server-over-http]
1889for a slightly more sophisticated setup using WebDAV which also
1890allows pushing over http.)
1891
1892[[exporting-via-git]]
1893Exporting a git repository via the git protocol
1894-----------------------------------------------
1895
1896This is the preferred method.
1897
1898For now, we refer you to the gitlink:git-daemon[1] man page for
1899instructions.  (See especially the examples section.)
1900
1901[[pushing-changes-to-a-public-repository]]
1902Pushing changes to a public repository
1903--------------------------------------
1904
1905Note that the two techniques outline above (exporting via
1906<<exporting-via-http,http>> or <<exporting-via-git,git>>) allow other
1907maintainers to fetch your latest changes, but they do not allow write
1908access, which you will need to update the public repository with the
1909latest changes created in your private repository.
1910
1911The simplest way to do this is using gitlink:git-push[1] and ssh; to
1912update the remote branch named "master" with the latest state of your
1913branch named "master", run
1914
1915-------------------------------------------------
1916$ git push ssh://yourserver.com/~you/proj.git master:master
1917-------------------------------------------------
1918
1919or just
1920
1921-------------------------------------------------
1922$ git push ssh://yourserver.com/~you/proj.git master
1923-------------------------------------------------
1924
1925As with git-fetch, git-push will complain if this does not result in
1926a <<fast-forwards,fast forward>>.  Normally this is a sign of
1927something wrong.  However, if you are sure you know what you're
1928doing, you may force git-push to perform the update anyway by
1929proceeding the branch name by a plus sign:
1930
1931-------------------------------------------------
1932$ git push ssh://yourserver.com/~you/proj.git +master
1933-------------------------------------------------
1934
1935As with git-fetch, you may also set up configuration options to
1936save typing; so, for example, after
1937
1938-------------------------------------------------
1939$ cat >>.git/config <<EOF
1940[remote "public-repo"]
1941        url = ssh://yourserver.com/~you/proj.git
1942EOF
1943-------------------------------------------------
1944
1945you should be able to perform the above push with just
1946
1947-------------------------------------------------
1948$ git push public-repo master
1949-------------------------------------------------
1950
1951See the explanations of the remote.<name>.url, branch.<name>.remote,
1952and remote.<name>.push options in gitlink:git-config[1] for
1953details.
1954
1955[[setting-up-a-shared-repository]]
1956Setting up a shared repository
1957------------------------------
1958
1959Another way to collaborate is by using a model similar to that
1960commonly used in CVS, where several developers with special rights
1961all push to and pull from a single shared repository.  See
1962link:cvs-migration.txt[git for CVS users] for instructions on how to
1963set this up.
1964
1965[[setting-up-gitweb]]
1966Allow web browsing of a repository
1967----------------------------------
1968
1969The gitweb cgi script provides users an easy way to browse your
1970project's files and history without having to install git; see the file
1971gitweb/INSTALL in the git source tree for instructions on setting it up.
1972
1973[[sharing-development-examples]]
1974Examples
1975--------
1976
1977TODO: topic branches, typical roles as in everyday.txt, ?
1978
1979
1980[[cleaning-up-history]]
1981Rewriting history and maintaining patch series
1982==============================================
1983
1984Normally commits are only added to a project, never taken away or
1985replaced.  Git is designed with this assumption, and violating it will
1986cause git's merge machinery (for example) to do the wrong thing.
1987
1988However, there is a situation in which it can be useful to violate this
1989assumption.
1990
1991[[patch-series]]
1992Creating the perfect patch series
1993---------------------------------
1994
1995Suppose you are a contributor to a large project, and you want to add a
1996complicated feature, and to present it to the other developers in a way
1997that makes it easy for them to read your changes, verify that they are
1998correct, and understand why you made each change.
1999
2000If you present all of your changes as a single patch (or commit), they
2001may find that it is too much to digest all at once.
2002
2003If you present them with the entire history of your work, complete with
2004mistakes, corrections, and dead ends, they may be overwhelmed.
2005
2006So the ideal is usually to produce a series of patches such that:
2007
2008        1. Each patch can be applied in order.
2009
2010        2. Each patch includes a single logical change, together with a
2011           message explaining the change.
2012
2013        3. No patch introduces a regression: after applying any initial
2014           part of the series, the resulting project still compiles and
2015           works, and has no bugs that it didn't have before.
2016
2017        4. The complete series produces the same end result as your own
2018           (probably much messier!) development process did.
2019
2020We will introduce some tools that can help you do this, explain how to
2021use them, and then explain some of the problems that can arise because
2022you are rewriting history.
2023
2024[[using-git-rebase]]
2025Keeping a patch series up to date using git-rebase
2026--------------------------------------------------
2027
2028Suppose that you create a branch "mywork" on a remote-tracking branch
2029"origin", and create some commits on top of it:
2030
2031-------------------------------------------------
2032$ git checkout -b mywork origin
2033$ vi file.txt
2034$ git commit
2035$ vi otherfile.txt
2036$ git commit
2037...
2038-------------------------------------------------
2039
2040You have performed no merges into mywork, so it is just a simple linear
2041sequence of patches on top of "origin":
2042
2043................................................
2044 o--o--o <-- origin
2045        \
2046         o--o--o <-- mywork
2047................................................
2048
2049Some more interesting work has been done in the upstream project, and
2050"origin" has advanced:
2051
2052................................................
2053 o--o--O--o--o--o <-- origin
2054        \
2055         a--b--c <-- mywork
2056................................................
2057
2058At this point, you could use "pull" to merge your changes back in;
2059the result would create a new merge commit, like this:
2060
2061................................................
2062 o--o--O--o--o--o <-- origin
2063        \        \
2064         a--b--c--m <-- mywork
2065................................................
2066 
2067However, if you prefer to keep the history in mywork a simple series of
2068commits without any merges, you may instead choose to use
2069gitlink:git-rebase[1]:
2070
2071-------------------------------------------------
2072$ git checkout mywork
2073$ git rebase origin
2074-------------------------------------------------
2075
2076This will remove each of your commits from mywork, temporarily saving
2077them as patches (in a directory named ".dotest"), update mywork to
2078point at the latest version of origin, then apply each of the saved
2079patches to the new mywork.  The result will look like:
2080
2081
2082................................................
2083 o--o--O--o--o--o <-- origin
2084                 \
2085                  a'--b'--c' <-- mywork
2086................................................
2087
2088In the process, it may discover conflicts.  In that case it will stop
2089and allow you to fix the conflicts; after fixing conflicts, use "git
2090add" to update the index with those contents, and then, instead of
2091running git-commit, just run
2092
2093-------------------------------------------------
2094$ git rebase --continue
2095-------------------------------------------------
2096
2097and git will continue applying the rest of the patches.
2098
2099At any point you may use the --abort option to abort this process and
2100return mywork to the state it had before you started the rebase:
2101
2102-------------------------------------------------
2103$ git rebase --abort
2104-------------------------------------------------
2105
2106[[modifying-one-commit]]
2107Modifying a single commit
2108-------------------------
2109
2110We saw in <<fixing-a-mistake-by-editing-history>> that you can replace the
2111most recent commit using
2112
2113-------------------------------------------------
2114$ git commit --amend
2115-------------------------------------------------
2116
2117which will replace the old commit by a new commit incorporating your
2118changes, giving you a chance to edit the old commit message first.
2119
2120You can also use a combination of this and gitlink:git-rebase[1] to edit
2121commits further back in your history.  First, tag the problematic commit with
2122
2123-------------------------------------------------
2124$ git tag bad mywork~5
2125-------------------------------------------------
2126
2127(Either gitk or git-log may be useful for finding the commit.)
2128
2129Then check out that commit, edit it, and rebase the rest of the series
2130on top of it (note that we could check out the commit on a temporary
2131branch, but instead we're using a <<detached-head,detached head>>):
2132
2133-------------------------------------------------
2134$ git checkout bad
2135$ # make changes here and update the index
2136$ git commit --amend
2137$ git rebase --onto HEAD bad mywork
2138-------------------------------------------------
2139
2140When you're done, you'll be left with mywork checked out, with the top
2141patches on mywork reapplied on top of your modified commit.  You can
2142then clean up with
2143
2144-------------------------------------------------
2145$ git tag -d bad
2146-------------------------------------------------
2147
2148Note that the immutable nature of git history means that you haven't really
2149"modified" existing commits; instead, you have replaced the old commits with
2150new commits having new object names.
2151
2152[[reordering-patch-series]]
2153Reordering or selecting from a patch series
2154-------------------------------------------
2155
2156Given one existing commit, the gitlink:git-cherry-pick[1] command
2157allows you to apply the change introduced by that commit and create a
2158new commit that records it.  So, for example, if "mywork" points to a
2159series of patches on top of "origin", you might do something like:
2160
2161-------------------------------------------------
2162$ git checkout -b mywork-new origin
2163$ gitk origin..mywork &
2164-------------------------------------------------
2165
2166And browse through the list of patches in the mywork branch using gitk,
2167applying them (possibly in a different order) to mywork-new using
2168cherry-pick, and possibly modifying them as you go using commit
2169--amend.
2170
2171Another technique is to use git-format-patch to create a series of
2172patches, then reset the state to before the patches:
2173
2174-------------------------------------------------
2175$ git format-patch origin
2176$ git reset --hard origin
2177-------------------------------------------------
2178
2179Then modify, reorder, or eliminate patches as preferred before applying
2180them again with gitlink:git-am[1].
2181
2182[[patch-series-tools]]
2183Other tools
2184-----------
2185
2186There are numerous other tools, such as stgit, which exist for the
2187purpose of maintaining a patch series.  These are outside of the scope of
2188this manual.
2189
2190[[problems-with-rewriting-history]]
2191Problems with rewriting history
2192-------------------------------
2193
2194The primary problem with rewriting the history of a branch has to do
2195with merging.  Suppose somebody fetches your branch and merges it into
2196their branch, with a result something like this:
2197
2198................................................
2199 o--o--O--o--o--o <-- origin
2200        \        \
2201         t--t--t--m <-- their branch:
2202................................................
2203
2204Then suppose you modify the last three commits:
2205
2206................................................
2207         o--o--o <-- new head of origin
2208        /
2209 o--o--O--o--o--o <-- old head of origin
2210................................................
2211
2212If we examined all this history together in one repository, it will
2213look like:
2214
2215................................................
2216         o--o--o <-- new head of origin
2217        /
2218 o--o--O--o--o--o <-- old head of origin
2219        \        \
2220         t--t--t--m <-- their branch:
2221................................................
2222
2223Git has no way of knowing that the new head is an updated version of
2224the old head; it treats this situation exactly the same as it would if
2225two developers had independently done the work on the old and new heads
2226in parallel.  At this point, if someone attempts to merge the new head
2227in to their branch, git will attempt to merge together the two (old and
2228new) lines of development, instead of trying to replace the old by the
2229new.  The results are likely to be unexpected.
2230
2231You may still choose to publish branches whose history is rewritten,
2232and it may be useful for others to be able to fetch those branches in
2233order to examine or test them, but they should not attempt to pull such
2234branches into their own work.
2235
2236For true distributed development that supports proper merging,
2237published branches should never be rewritten.
2238
2239[[advanced-branch-management]]
2240Advanced branch management
2241==========================
2242
2243[[fetching-individual-branches]]
2244Fetching individual branches
2245----------------------------
2246
2247Instead of using gitlink:git-remote[1], you can also choose just
2248to update one branch at a time, and to store it locally under an
2249arbitrary name:
2250
2251-------------------------------------------------
2252$ git fetch origin todo:my-todo-work
2253-------------------------------------------------
2254
2255The first argument, "origin", just tells git to fetch from the
2256repository you originally cloned from.  The second argument tells git
2257to fetch the branch named "todo" from the remote repository, and to
2258store it locally under the name refs/heads/my-todo-work.
2259
2260You can also fetch branches from other repositories; so
2261
2262-------------------------------------------------
2263$ git fetch git://example.com/proj.git master:example-master
2264-------------------------------------------------
2265
2266will create a new branch named "example-master" and store in it the
2267branch named "master" from the repository at the given URL.  If you
2268already have a branch named example-master, it will attempt to
2269<<fast-forwards,fast-forward>> to the commit given by example.com's
2270master branch.  In more detail:
2271
2272[[fetch-fast-forwards]]
2273git fetch and fast-forwards
2274---------------------------
2275
2276In the previous example, when updating an existing branch, "git
2277fetch" checks to make sure that the most recent commit on the remote
2278branch is a descendant of the most recent commit on your copy of the
2279branch before updating your copy of the branch to point at the new
2280commit.  Git calls this process a <<fast-forwards,fast forward>>.
2281
2282A fast forward looks something like this:
2283
2284................................................
2285 o--o--o--o <-- old head of the branch
2286           \
2287            o--o--o <-- new head of the branch
2288................................................
2289
2290
2291In some cases it is possible that the new head will *not* actually be
2292a descendant of the old head.  For example, the developer may have
2293realized she made a serious mistake, and decided to backtrack,
2294resulting in a situation like:
2295
2296................................................
2297 o--o--o--o--a--b <-- old head of the branch
2298           \
2299            o--o--o <-- new head of the branch
2300................................................
2301
2302In this case, "git fetch" will fail, and print out a warning.
2303
2304In that case, you can still force git to update to the new head, as
2305described in the following section.  However, note that in the
2306situation above this may mean losing the commits labeled "a" and "b",
2307unless you've already created a reference of your own pointing to
2308them.
2309
2310[[forcing-fetch]]
2311Forcing git fetch to do non-fast-forward updates
2312------------------------------------------------
2313
2314If git fetch fails because the new head of a branch is not a
2315descendant of the old head, you may force the update with:
2316
2317-------------------------------------------------
2318$ git fetch git://example.com/proj.git +master:refs/remotes/example/master
2319-------------------------------------------------
2320
2321Note the addition of the "+" sign.  Alternatively, you can use the "-f"
2322flag to force updates of all the fetched branches, as in:
2323
2324-------------------------------------------------
2325$ git fetch -f origin
2326-------------------------------------------------
2327
2328Be aware that commits that the old version of example/master pointed at
2329may be lost, as we saw in the previous section.
2330
2331[[remote-branch-configuration]]
2332Configuring remote branches
2333---------------------------
2334
2335We saw above that "origin" is just a shortcut to refer to the
2336repository that you originally cloned from.  This information is
2337stored in git configuration variables, which you can see using
2338gitlink:git-config[1]:
2339
2340-------------------------------------------------
2341$ git config -l
2342core.repositoryformatversion=0
2343core.filemode=true
2344core.logallrefupdates=true
2345remote.origin.url=git://git.kernel.org/pub/scm/git/git.git
2346remote.origin.fetch=+refs/heads/*:refs/remotes/origin/*
2347branch.master.remote=origin
2348branch.master.merge=refs/heads/master
2349-------------------------------------------------
2350
2351If there are other repositories that you also use frequently, you can
2352create similar configuration options to save typing; for example,
2353after
2354
2355-------------------------------------------------
2356$ git config remote.example.url git://example.com/proj.git
2357-------------------------------------------------
2358
2359then the following two commands will do the same thing:
2360
2361-------------------------------------------------
2362$ git fetch git://example.com/proj.git master:refs/remotes/example/master
2363$ git fetch example master:refs/remotes/example/master
2364-------------------------------------------------
2365
2366Even better, if you add one more option:
2367
2368-------------------------------------------------
2369$ git config remote.example.fetch master:refs/remotes/example/master
2370-------------------------------------------------
2371
2372then the following commands will all do the same thing:
2373
2374-------------------------------------------------
2375$ git fetch git://example.com/proj.git master:refs/remotes/example/master
2376$ git fetch example master:refs/remotes/example/master
2377$ git fetch example
2378-------------------------------------------------
2379
2380You can also add a "+" to force the update each time:
2381
2382-------------------------------------------------
2383$ git config remote.example.fetch +master:ref/remotes/example/master
2384-------------------------------------------------
2385
2386Don't do this unless you're sure you won't mind "git fetch" possibly
2387throwing away commits on mybranch.
2388
2389Also note that all of the above configuration can be performed by
2390directly editing the file .git/config instead of using
2391gitlink:git-config[1].
2392
2393See gitlink:git-config[1] for more details on the configuration
2394options mentioned above.
2395
2396
2397[[git-internals]]
2398Git internals
2399=============
2400
2401Git depends on two fundamental abstractions: the "object database", and
2402the "current directory cache" aka "index".
2403
2404[[the-object-database]]
2405The Object Database
2406-------------------
2407
2408The object database is literally just a content-addressable collection
2409of objects.  All objects are named by their content, which is
2410approximated by the SHA1 hash of the object itself.  Objects may refer
2411to other objects (by referencing their SHA1 hash), and so you can
2412build up a hierarchy of objects.
2413
2414All objects have a statically determined "type" which is
2415determined at object creation time, and which identifies the format of
2416the object (i.e. how it is used, and how it can refer to other
2417objects).  There are currently four different object types: "blob",
2418"tree", "commit", and "tag".
2419
2420A <<def_blob_object,"blob" object>> cannot refer to any other object,
2421and is, as the name implies, a pure storage object containing some
2422user data.  It is used to actually store the file data, i.e. a blob
2423object is associated with some particular version of some file.
2424
2425A <<def_tree_object,"tree" object>> is an object that ties one or more
2426"blob" objects into a directory structure. In addition, a tree object
2427can refer to other tree objects, thus creating a directory hierarchy.
2428
2429A <<def_commit_object,"commit" object>> ties such directory hierarchies
2430together into a <<def_DAG,directed acyclic graph>> of revisions - each
2431"commit" is associated with exactly one tree (the directory hierarchy at
2432the time of the commit). In addition, a "commit" refers to one or more
2433"parent" commit objects that describe the history of how we arrived at
2434that directory hierarchy.
2435
2436As a special case, a commit object with no parents is called the "root"
2437commit, and is the point of an initial project commit.  Each project
2438must have at least one root, and while you can tie several different
2439root objects together into one project by creating a commit object which
2440has two or more separate roots as its ultimate parents, that's probably
2441just going to confuse people.  So aim for the notion of "one root object
2442per project", even if git itself does not enforce that. 
2443
2444A <<def_tag_object,"tag" object>> symbolically identifies and can be
2445used to sign other objects. It contains the identifier and type of
2446another object, a symbolic name (of course!) and, optionally, a
2447signature.
2448
2449Regardless of object type, all objects share the following
2450characteristics: they are all deflated with zlib, and have a header
2451that not only specifies their type, but also provides size information
2452about the data in the object.  It's worth noting that the SHA1 hash
2453that is used to name the object is the hash of the original data
2454plus this header, so `sha1sum` 'file' does not match the object name
2455for 'file'.
2456(Historical note: in the dawn of the age of git the hash
2457was the sha1 of the 'compressed' object.)
2458
2459As a result, the general consistency of an object can always be tested
2460independently of the contents or the type of the object: all objects can
2461be validated by verifying that (a) their hashes match the content of the
2462file and (b) the object successfully inflates to a stream of bytes that
2463forms a sequence of <ascii type without space> + <space> + <ascii decimal
2464size> + <byte\0> + <binary object data>. 
2465
2466The structured objects can further have their structure and
2467connectivity to other objects verified. This is generally done with
2468the `git-fsck` program, which generates a full dependency graph
2469of all objects, and verifies their internal consistency (in addition
2470to just verifying their superficial consistency through the hash).
2471
2472The object types in some more detail:
2473
2474[[blob-object]]
2475Blob Object
2476-----------
2477
2478A "blob" object is nothing but a binary blob of data, and doesn't
2479refer to anything else.  There is no signature or any other
2480verification of the data, so while the object is consistent (it 'is'
2481indexed by its sha1 hash, so the data itself is certainly correct), it
2482has absolutely no other attributes.  No name associations, no
2483permissions.  It is purely a blob of data (i.e. normally "file
2484contents").
2485
2486In particular, since the blob is entirely defined by its data, if two
2487files in a directory tree (or in multiple different versions of the
2488repository) have the same contents, they will share the same blob
2489object. The object is totally independent of its location in the
2490directory tree, and renaming a file does not change the object that
2491file is associated with in any way.
2492
2493A blob is typically created when gitlink:git-update-index[1]
2494is run, and its data can be accessed by gitlink:git-cat-file[1].
2495
2496[[tree-object]]
2497Tree Object
2498-----------
2499
2500The next hierarchical object type is the "tree" object.  A tree object
2501is a list of mode/name/blob data, sorted by name.  Alternatively, the
2502mode data may specify a directory mode, in which case instead of
2503naming a blob, that name is associated with another TREE object.
2504
2505Like the "blob" object, a tree object is uniquely determined by the
2506set contents, and so two separate but identical trees will always
2507share the exact same object. This is true at all levels, i.e. it's
2508true for a "leaf" tree (which does not refer to any other trees, only
2509blobs) as well as for a whole subdirectory.
2510
2511For that reason a "tree" object is just a pure data abstraction: it
2512has no history, no signatures, no verification of validity, except
2513that since the contents are again protected by the hash itself, we can
2514trust that the tree is immutable and its contents never change.
2515
2516So you can trust the contents of a tree to be valid, the same way you
2517can trust the contents of a blob, but you don't know where those
2518contents 'came' from.
2519
2520Side note on trees: since a "tree" object is a sorted list of
2521"filename+content", you can create a diff between two trees without
2522actually having to unpack two trees.  Just ignore all common parts,
2523and your diff will look right.  In other words, you can effectively
2524(and efficiently) tell the difference between any two random trees by
2525O(n) where "n" is the size of the difference, rather than the size of
2526the tree.
2527
2528Side note 2 on trees: since the name of a "blob" depends entirely and
2529exclusively on its contents (i.e. there are no names or permissions
2530involved), you can see trivial renames or permission changes by
2531noticing that the blob stayed the same.  However, renames with data
2532changes need a smarter "diff" implementation.
2533
2534A tree is created with gitlink:git-write-tree[1] and
2535its data can be accessed by gitlink:git-ls-tree[1].
2536Two trees can be compared with gitlink:git-diff-tree[1].
2537
2538[[commit-object]]
2539Commit Object
2540-------------
2541
2542The "commit" object is an object that introduces the notion of
2543history into the picture.  In contrast to the other objects, it
2544doesn't just describe the physical state of a tree, it describes how
2545we got there, and why.
2546
2547A "commit" is defined by the tree-object that it results in, the
2548parent commits (zero, one or more) that led up to that point, and a
2549comment on what happened.  Again, a commit is not trusted per se:
2550the contents are well-defined and "safe" due to the cryptographically
2551strong signatures at all levels, but there is no reason to believe
2552that the tree is "good" or that the merge information makes sense.
2553The parents do not have to actually have any relationship with the
2554result, for example.
2555
2556Note on commits: unlike some SCM's, commits do not contain
2557rename information or file mode change information.  All of that is
2558implicit in the trees involved (the result tree, and the result trees
2559of the parents), and describing that makes no sense in this idiotic
2560file manager.
2561
2562A commit is created with gitlink:git-commit-tree[1] and
2563its data can be accessed by gitlink:git-cat-file[1].
2564
2565[[trust]]
2566Trust
2567-----
2568
2569An aside on the notion of "trust". Trust is really outside the scope
2570of "git", but it's worth noting a few things.  First off, since
2571everything is hashed with SHA1, you 'can' trust that an object is
2572intact and has not been messed with by external sources.  So the name
2573of an object uniquely identifies a known state - just not a state that
2574you may want to trust.
2575
2576Furthermore, since the SHA1 signature of a commit refers to the
2577SHA1 signatures of the tree it is associated with and the signatures
2578of the parent, a single named commit specifies uniquely a whole set
2579of history, with full contents.  You can't later fake any step of the
2580way once you have the name of a commit.
2581
2582So to introduce some real trust in the system, the only thing you need
2583to do is to digitally sign just 'one' special note, which includes the
2584name of a top-level commit.  Your digital signature shows others
2585that you trust that commit, and the immutability of the history of
2586commits tells others that they can trust the whole history.
2587
2588In other words, you can easily validate a whole archive by just
2589sending out a single email that tells the people the name (SHA1 hash)
2590of the top commit, and digitally sign that email using something
2591like GPG/PGP.
2592
2593To assist in this, git also provides the tag object...
2594
2595[[tag-object]]
2596Tag Object
2597----------
2598
2599Git provides the "tag" object to simplify creating, managing and
2600exchanging symbolic and signed tokens.  The "tag" object at its
2601simplest simply symbolically identifies another object by containing
2602the sha1, type and symbolic name.
2603
2604However it can optionally contain additional signature information
2605(which git doesn't care about as long as there's less than 8k of
2606it). This can then be verified externally to git.
2607
2608Note that despite the tag features, "git" itself only handles content
2609integrity; the trust framework (and signature provision and
2610verification) has to come from outside.
2611
2612A tag is created with gitlink:git-mktag[1],
2613its data can be accessed by gitlink:git-cat-file[1],
2614and the signature can be verified by
2615gitlink:git-verify-tag[1].
2616
2617
2618[[the-index]]
2619The "index" aka "Current Directory Cache"
2620-----------------------------------------
2621
2622The index is a simple binary file, which contains an efficient
2623representation of the contents of a virtual directory.  It
2624does so by a simple array that associates a set of names, dates,
2625permissions and content (aka "blob") objects together.  The cache is
2626always kept ordered by name, and names are unique (with a few very
2627specific rules) at any point in time, but the cache has no long-term
2628meaning, and can be partially updated at any time.
2629
2630In particular, the index certainly does not need to be consistent with
2631the current directory contents (in fact, most operations will depend on
2632different ways to make the index 'not' be consistent with the directory
2633hierarchy), but it has three very important attributes:
2634
2635'(a) it can re-generate the full state it caches (not just the
2636directory structure: it contains pointers to the "blob" objects so
2637that it can regenerate the data too)'
2638
2639As a special case, there is a clear and unambiguous one-way mapping
2640from a current directory cache to a "tree object", which can be
2641efficiently created from just the current directory cache without
2642actually looking at any other data.  So a directory cache at any one
2643time uniquely specifies one and only one "tree" object (but has
2644additional data to make it easy to match up that tree object with what
2645has happened in the directory)
2646
2647'(b) it has efficient methods for finding inconsistencies between that
2648cached state ("tree object waiting to be instantiated") and the
2649current state.'
2650
2651'(c) it can additionally efficiently represent information about merge
2652conflicts between different tree objects, allowing each pathname to be
2653associated with sufficient information about the trees involved that
2654you can create a three-way merge between them.'
2655
2656Those are the ONLY three things that the directory cache does.  It's a
2657cache, and the normal operation is to re-generate it completely from a
2658known tree object, or update/compare it with a live tree that is being
2659developed.  If you blow the directory cache away entirely, you generally
2660haven't lost any information as long as you have the name of the tree
2661that it described. 
2662
2663At the same time, the index is at the same time also the
2664staging area for creating new trees, and creating a new tree always
2665involves a controlled modification of the index file.  In particular,
2666the index file can have the representation of an intermediate tree that
2667has not yet been instantiated.  So the index can be thought of as a
2668write-back cache, which can contain dirty information that has not yet
2669been written back to the backing store.
2670
2671
2672
2673[[the-workflow]]
2674The Workflow
2675------------
2676
2677Generally, all "git" operations work on the index file. Some operations
2678work *purely* on the index file (showing the current state of the
2679index), but most operations move data to and from the index file. Either
2680from the database or from the working directory. Thus there are four
2681main combinations: 
2682
2683[[working-directory-to-index]]
2684working directory -> index
2685~~~~~~~~~~~~~~~~~~~~~~~~~~
2686
2687You update the index with information from the working directory with
2688the gitlink:git-update-index[1] command.  You
2689generally update the index information by just specifying the filename
2690you want to update, like so:
2691
2692-------------------------------------------------
2693$ git-update-index filename
2694-------------------------------------------------
2695
2696but to avoid common mistakes with filename globbing etc, the command
2697will not normally add totally new entries or remove old entries,
2698i.e. it will normally just update existing cache entries.
2699
2700To tell git that yes, you really do realize that certain files no
2701longer exist, or that new files should be added, you
2702should use the `--remove` and `--add` flags respectively.
2703
2704NOTE! A `--remove` flag does 'not' mean that subsequent filenames will
2705necessarily be removed: if the files still exist in your directory
2706structure, the index will be updated with their new status, not
2707removed. The only thing `--remove` means is that update-cache will be
2708considering a removed file to be a valid thing, and if the file really
2709does not exist any more, it will update the index accordingly.
2710
2711As a special case, you can also do `git-update-index --refresh`, which
2712will refresh the "stat" information of each index to match the current
2713stat information. It will 'not' update the object status itself, and
2714it will only update the fields that are used to quickly test whether
2715an object still matches its old backing store object.
2716
2717[[index-to-object-database]]
2718index -> object database
2719~~~~~~~~~~~~~~~~~~~~~~~~
2720
2721You write your current index file to a "tree" object with the program
2722
2723-------------------------------------------------
2724$ git-write-tree
2725-------------------------------------------------
2726
2727that doesn't come with any options - it will just write out the
2728current index into the set of tree objects that describe that state,
2729and it will return the name of the resulting top-level tree. You can
2730use that tree to re-generate the index at any time by going in the
2731other direction:
2732
2733[[object-database-to-index]]
2734object database -> index
2735~~~~~~~~~~~~~~~~~~~~~~~~
2736
2737You read a "tree" file from the object database, and use that to
2738populate (and overwrite - don't do this if your index contains any
2739unsaved state that you might want to restore later!) your current
2740index.  Normal operation is just
2741
2742-------------------------------------------------
2743$ git-read-tree <sha1 of tree>
2744-------------------------------------------------
2745
2746and your index file will now be equivalent to the tree that you saved
2747earlier. However, that is only your 'index' file: your working
2748directory contents have not been modified.
2749
2750[[index-to-working-directory]]
2751index -> working directory
2752~~~~~~~~~~~~~~~~~~~~~~~~~~
2753
2754You update your working directory from the index by "checking out"
2755files. This is not a very common operation, since normally you'd just
2756keep your files updated, and rather than write to your working
2757directory, you'd tell the index files about the changes in your
2758working directory (i.e. `git-update-index`).
2759
2760However, if you decide to jump to a new version, or check out somebody
2761else's version, or just restore a previous tree, you'd populate your
2762index file with read-tree, and then you need to check out the result
2763with
2764
2765-------------------------------------------------
2766$ git-checkout-index filename
2767-------------------------------------------------
2768
2769or, if you want to check out all of the index, use `-a`.
2770
2771NOTE! git-checkout-index normally refuses to overwrite old files, so
2772if you have an old version of the tree already checked out, you will
2773need to use the "-f" flag ('before' the "-a" flag or the filename) to
2774'force' the checkout.
2775
2776
2777Finally, there are a few odds and ends which are not purely moving
2778from one representation to the other:
2779
2780[[tying-it-all-together]]
2781Tying it all together
2782~~~~~~~~~~~~~~~~~~~~~
2783
2784To commit a tree you have instantiated with "git-write-tree", you'd
2785create a "commit" object that refers to that tree and the history
2786behind it - most notably the "parent" commits that preceded it in
2787history.
2788
2789Normally a "commit" has one parent: the previous state of the tree
2790before a certain change was made. However, sometimes it can have two
2791or more parent commits, in which case we call it a "merge", due to the
2792fact that such a commit brings together ("merges") two or more
2793previous states represented by other commits.
2794
2795In other words, while a "tree" represents a particular directory state
2796of a working directory, a "commit" represents that state in "time",
2797and explains how we got there.
2798
2799You create a commit object by giving it the tree that describes the
2800state at the time of the commit, and a list of parents:
2801
2802-------------------------------------------------
2803$ git-commit-tree <tree> -p <parent> [-p <parent2> ..]
2804-------------------------------------------------
2805
2806and then giving the reason for the commit on stdin (either through
2807redirection from a pipe or file, or by just typing it at the tty).
2808
2809git-commit-tree will return the name of the object that represents
2810that commit, and you should save it away for later use. Normally,
2811you'd commit a new `HEAD` state, and while git doesn't care where you
2812save the note about that state, in practice we tend to just write the
2813result to the file pointed at by `.git/HEAD`, so that we can always see
2814what the last committed state was.
2815
2816Here is an ASCII art by Jon Loeliger that illustrates how
2817various pieces fit together.
2818
2819------------
2820
2821                     commit-tree
2822                      commit obj
2823                       +----+
2824                       |    |
2825                       |    |
2826                       V    V
2827                    +-----------+
2828                    | Object DB |
2829                    |  Backing  |
2830                    |   Store   |
2831                    +-----------+
2832                       ^
2833           write-tree  |     |
2834             tree obj  |     |
2835                       |     |  read-tree
2836                       |     |  tree obj
2837                             V
2838                    +-----------+
2839                    |   Index   |
2840                    |  "cache"  |
2841                    +-----------+
2842         update-index  ^
2843             blob obj  |     |
2844                       |     |
2845    checkout-index -u  |     |  checkout-index
2846             stat      |     |  blob obj
2847                             V
2848                    +-----------+
2849                    |  Working  |
2850                    | Directory |
2851                    +-----------+
2852
2853------------
2854
2855
2856[[examining-the-data]]
2857Examining the data
2858------------------
2859
2860You can examine the data represented in the object database and the
2861index with various helper tools. For every object, you can use
2862gitlink:git-cat-file[1] to examine details about the
2863object:
2864
2865-------------------------------------------------
2866$ git-cat-file -t <objectname>
2867-------------------------------------------------
2868
2869shows the type of the object, and once you have the type (which is
2870usually implicit in where you find the object), you can use
2871
2872-------------------------------------------------
2873$ git-cat-file blob|tree|commit|tag <objectname>
2874-------------------------------------------------
2875
2876to show its contents. NOTE! Trees have binary content, and as a result
2877there is a special helper for showing that content, called
2878`git-ls-tree`, which turns the binary content into a more easily
2879readable form.
2880
2881It's especially instructive to look at "commit" objects, since those
2882tend to be small and fairly self-explanatory. In particular, if you
2883follow the convention of having the top commit name in `.git/HEAD`,
2884you can do
2885
2886-------------------------------------------------
2887$ git-cat-file commit HEAD
2888-------------------------------------------------
2889
2890to see what the top commit was.
2891
2892[[merging-multiple-trees]]
2893Merging multiple trees
2894----------------------
2895
2896Git helps you do a three-way merge, which you can expand to n-way by
2897repeating the merge procedure arbitrary times until you finally
2898"commit" the state.  The normal situation is that you'd only do one
2899three-way merge (two parents), and commit it, but if you like to, you
2900can do multiple parents in one go.
2901
2902To do a three-way merge, you need the two sets of "commit" objects
2903that you want to merge, use those to find the closest common parent (a
2904third "commit" object), and then use those commit objects to find the
2905state of the directory ("tree" object) at these points.
2906
2907To get the "base" for the merge, you first look up the common parent
2908of two commits with
2909
2910-------------------------------------------------
2911$ git-merge-base <commit1> <commit2>
2912-------------------------------------------------
2913
2914which will return you the commit they are both based on.  You should
2915now look up the "tree" objects of those commits, which you can easily
2916do with (for example)
2917
2918-------------------------------------------------
2919$ git-cat-file commit <commitname> | head -1
2920-------------------------------------------------
2921
2922since the tree object information is always the first line in a commit
2923object.
2924
2925Once you know the three trees you are going to merge (the one "original"
2926tree, aka the common tree, and the two "result" trees, aka the branches
2927you want to merge), you do a "merge" read into the index. This will
2928complain if it has to throw away your old index contents, so you should
2929make sure that you've committed those - in fact you would normally
2930always do a merge against your last commit (which should thus match what
2931you have in your current index anyway).
2932
2933To do the merge, do
2934
2935-------------------------------------------------
2936$ git-read-tree -m -u <origtree> <yourtree> <targettree>
2937-------------------------------------------------
2938
2939which will do all trivial merge operations for you directly in the
2940index file, and you can just write the result out with
2941`git-write-tree`.
2942
2943
2944[[merging-multiple-trees-2]]
2945Merging multiple trees, continued
2946---------------------------------
2947
2948Sadly, many merges aren't trivial. If there are files that have
2949been added.moved or removed, or if both branches have modified the
2950same file, you will be left with an index tree that contains "merge
2951entries" in it. Such an index tree can 'NOT' be written out to a tree
2952object, and you will have to resolve any such merge clashes using
2953other tools before you can write out the result.
2954
2955You can examine such index state with `git-ls-files --unmerged`
2956command.  An example:
2957
2958------------------------------------------------
2959$ git-read-tree -m $orig HEAD $target
2960$ git-ls-files --unmerged
2961100644 263414f423d0e4d70dae8fe53fa34614ff3e2860 1       hello.c
2962100644 06fa6a24256dc7e560efa5687fa84b51f0263c3a 2       hello.c
2963100644 cc44c73eb783565da5831b4d820c962954019b69 3       hello.c
2964------------------------------------------------
2965
2966Each line of the `git-ls-files --unmerged` output begins with
2967the blob mode bits, blob SHA1, 'stage number', and the
2968filename.  The 'stage number' is git's way to say which tree it
2969came from: stage 1 corresponds to `$orig` tree, stage 2 `HEAD`
2970tree, and stage3 `$target` tree.
2971
2972Earlier we said that trivial merges are done inside
2973`git-read-tree -m`.  For example, if the file did not change
2974from `$orig` to `HEAD` nor `$target`, or if the file changed
2975from `$orig` to `HEAD` and `$orig` to `$target` the same way,
2976obviously the final outcome is what is in `HEAD`.  What the
2977above example shows is that file `hello.c` was changed from
2978`$orig` to `HEAD` and `$orig` to `$target` in a different way.
2979You could resolve this by running your favorite 3-way merge
2980program, e.g.  `diff3`, `merge`, or git's own merge-file, on
2981the blob objects from these three stages yourself, like this:
2982
2983------------------------------------------------
2984$ git-cat-file blob 263414f... >hello.c~1
2985$ git-cat-file blob 06fa6a2... >hello.c~2
2986$ git-cat-file blob cc44c73... >hello.c~3
2987$ git merge-file hello.c~2 hello.c~1 hello.c~3
2988------------------------------------------------
2989
2990This would leave the merge result in `hello.c~2` file, along
2991with conflict markers if there are conflicts.  After verifying
2992the merge result makes sense, you can tell git what the final
2993merge result for this file is by:
2994
2995-------------------------------------------------
2996$ mv -f hello.c~2 hello.c
2997$ git-update-index hello.c
2998-------------------------------------------------
2999
3000When a path is in unmerged state, running `git-update-index` for
3001that path tells git to mark the path resolved.
3002
3003The above is the description of a git merge at the lowest level,
3004to help you understand what conceptually happens under the hood.
3005In practice, nobody, not even git itself, uses three `git-cat-file`
3006for this.  There is `git-merge-index` program that extracts the
3007stages to temporary files and calls a "merge" script on it:
3008
3009-------------------------------------------------
3010$ git-merge-index git-merge-one-file hello.c
3011-------------------------------------------------
3012
3013and that is what higher level `git merge -s resolve` is implemented with.
3014
3015[[pack-files]]
3016How git stores objects efficiently: pack files
3017----------------------------------------------
3018
3019We've seen how git stores each object in a file named after the
3020object's SHA1 hash.
3021
3022Unfortunately this system becomes inefficient once a project has a
3023lot of objects.  Try this on an old project:
3024
3025------------------------------------------------
3026$ git count-objects
30276930 objects, 47620 kilobytes
3028------------------------------------------------
3029
3030The first number is the number of objects which are kept in
3031individual files.  The second is the amount of space taken up by
3032those "loose" objects.
3033
3034You can save space and make git faster by moving these loose objects in
3035to a "pack file", which stores a group of objects in an efficient
3036compressed format; the details of how pack files are formatted can be
3037found in link:technical/pack-format.txt[technical/pack-format.txt].
3038
3039To put the loose objects into a pack, just run git repack:
3040
3041------------------------------------------------
3042$ git repack
3043Generating pack...
3044Done counting 6020 objects.
3045Deltifying 6020 objects.
3046 100% (6020/6020) done
3047Writing 6020 objects.
3048 100% (6020/6020) done
3049Total 6020, written 6020 (delta 4070), reused 0 (delta 0)
3050Pack pack-3e54ad29d5b2e05838c75df582c65257b8d08e1c created.
3051------------------------------------------------
3052
3053You can then run
3054
3055------------------------------------------------
3056$ git prune
3057------------------------------------------------
3058
3059to remove any of the "loose" objects that are now contained in the
3060pack.  This will also remove any unreferenced objects (which may be
3061created when, for example, you use "git reset" to remove a commit).
3062You can verify that the loose objects are gone by looking at the
3063.git/objects directory or by running
3064
3065------------------------------------------------
3066$ git count-objects
30670 objects, 0 kilobytes
3068------------------------------------------------
3069
3070Although the object files are gone, any commands that refer to those
3071objects will work exactly as they did before.
3072
3073The gitlink:git-gc[1] command performs packing, pruning, and more for
3074you, so is normally the only high-level command you need.
3075
3076[[dangling-objects]]
3077Dangling objects
3078----------------
3079
3080The gitlink:git-fsck[1] command will sometimes complain about dangling
3081objects.  They are not a problem.
3082
3083The most common cause of dangling objects is that you've rebased a
3084branch, or you have pulled from somebody else who rebased a branch--see
3085<<cleaning-up-history>>.  In that case, the old head of the original
3086branch still exists, as does everything it pointed to. The branch
3087pointer itself just doesn't, since you replaced it with another one.
3088
3089There are also other situations that cause dangling objects. For
3090example, a "dangling blob" may arise because you did a "git add" of a
3091file, but then, before you actually committed it and made it part of the
3092bigger picture, you changed something else in that file and committed
3093that *updated* thing - the old state that you added originally ends up
3094not being pointed to by any commit or tree, so it's now a dangling blob
3095object.
3096
3097Similarly, when the "recursive" merge strategy runs, and finds that
3098there are criss-cross merges and thus more than one merge base (which is
3099fairly unusual, but it does happen), it will generate one temporary
3100midway tree (or possibly even more, if you had lots of criss-crossing
3101merges and more than two merge bases) as a temporary internal merge
3102base, and again, those are real objects, but the end result will not end
3103up pointing to them, so they end up "dangling" in your repository.
3104
3105Generally, dangling objects aren't anything to worry about. They can
3106even be very useful: if you screw something up, the dangling objects can
3107be how you recover your old tree (say, you did a rebase, and realized
3108that you really didn't want to - you can look at what dangling objects
3109you have, and decide to reset your head to some old dangling state).
3110
3111For commits, you can just use:
3112
3113------------------------------------------------
3114$ gitk <dangling-commit-sha-goes-here> --not --all
3115------------------------------------------------
3116
3117This asks for all the history reachable from the given commit but not
3118from any branch, tag, or other reference.  If you decide it's something
3119you want, you can always create a new reference to it, e.g.,
3120
3121------------------------------------------------
3122$ git branch recovered-branch <dangling-commit-sha-goes-here>
3123------------------------------------------------
3124
3125For blobs and trees, you can't do the same, but you can still examine
3126them.  You can just do
3127
3128------------------------------------------------
3129$ git show <dangling-blob/tree-sha-goes-here>
3130------------------------------------------------
3131
3132to show what the contents of the blob were (or, for a tree, basically
3133what the "ls" for that directory was), and that may give you some idea
3134of what the operation was that left that dangling object.
3135
3136Usually, dangling blobs and trees aren't very interesting. They're
3137almost always the result of either being a half-way mergebase (the blob
3138will often even have the conflict markers from a merge in it, if you
3139have had conflicting merges that you fixed up by hand), or simply
3140because you interrupted a "git fetch" with ^C or something like that,
3141leaving _some_ of the new objects in the object database, but just
3142dangling and useless.
3143
3144Anyway, once you are sure that you're not interested in any dangling 
3145state, you can just prune all unreachable objects:
3146
3147------------------------------------------------
3148$ git prune
3149------------------------------------------------
3150
3151and they'll be gone. But you should only run "git prune" on a quiescent
3152repository - it's kind of like doing a filesystem fsck recovery: you
3153don't want to do that while the filesystem is mounted.
3154
3155(The same is true of "git-fsck" itself, btw - but since 
3156git-fsck never actually *changes* the repository, it just reports 
3157on what it found, git-fsck itself is never "dangerous" to run. 
3158Running it while somebody is actually changing the repository can cause 
3159confusing and scary messages, but it won't actually do anything bad. In 
3160contrast, running "git prune" while somebody is actively changing the 
3161repository is a *BAD* idea).
3162
3163[[glossary]]
3164include::glossary.txt[]
3165
3166[[todo]]
3167Notes and todo list for this manual
3168===================================
3169
3170This is a work in progress.
3171
3172The basic requirements:
3173        - It must be readable in order, from beginning to end, by
3174          someone intelligent with a basic grasp of the unix
3175          commandline, but without any special knowledge of git.  If
3176          necessary, any other prerequisites should be specifically
3177          mentioned as they arise.
3178        - Whenever possible, section headings should clearly describe
3179          the task they explain how to do, in language that requires
3180          no more knowledge than necessary: for example, "importing
3181          patches into a project" rather than "the git-am command"
3182
3183Think about how to create a clear chapter dependency graph that will
3184allow people to get to important topics without necessarily reading
3185everything in between.
3186
3187Say something about .gitignore.
3188
3189Scan Documentation/ for other stuff left out; in particular:
3190        howto's
3191        some of technical/?
3192        hooks
3193        list of commands in gitlink:git[1]
3194
3195Scan email archives for other stuff left out
3196
3197Scan man pages to see if any assume more background than this manual
3198provides.
3199
3200Simplify beginning by suggesting disconnected head instead of
3201temporary branch creation?
3202
3203Add more good examples.  Entire sections of just cookbook examples
3204might be a good idea; maybe make an "advanced examples" section a
3205standard end-of-chapter section?
3206
3207Include cross-references to the glossary, where appropriate.
3208
3209Document shallow clones?  See draft 1.5.0 release notes for some
3210documentation.
3211
3212Add a section on working with other version control systems, including
3213CVS, Subversion, and just imports of series of release tarballs.
3214
3215More details on gitweb?
3216
3217Write a chapter on using plumbing and writing scripts.