READMEon commit git-rev-list: use proper lazy reachability analysis (8906300)
   1////////////////////////////////////////////////////////////////
   2
   3        GIT - the stupid content tracker
   4
   5////////////////////////////////////////////////////////////////
   6"git" can mean anything, depending on your mood.
   7
   8 - random three-letter combination that is pronounceable, and not
   9   actually used by any common UNIX command.  The fact that it is a
  10   mispronunciation of "get" may or may not be relevant.
  11 - stupid. contemptible and despicable. simple. Take your pick from the
  12   dictionary of slang.
  13 - "global information tracker": you're in a good mood, and it actually
  14   works for you. Angels sing, and a light suddenly fills the room. 
  15 - "goddamn idiotic truckload of sh*t": when it breaks
  16
  17This is a stupid (but extremely fast) directory content manager.  It
  18doesn't do a whole lot, but what it _does_ do is track directory
  19contents efficiently. 
  20
  21There are two object abstractions: the "object database", and the
  22"current directory cache" aka "index".
  23
  24The Object Database
  25~~~~~~~~~~~~~~~~~~~
  26The object database is literally just a content-addressable collection
  27of objects.  All objects are named by their content, which is
  28approximated by the SHA1 hash of the object itself.  Objects may refer
  29to other objects (by referencing their SHA1 hash), and so you can
  30build up a hierarchy of objects.
  31
  32All objects have a statically determined "type" aka "tag", which is
  33determined at object creation time, and which identifies the format of
  34the object (i.e. how it is used, and how it can refer to other
  35objects).  There are currently five different object types: "blob",
  36"tree", "commit", "tag" and "delta"
  37
  38A "blob" object cannot refer to any other object, and is, like the tag
  39implies, a pure storage object containing some user data.  It is used to
  40actually store the file data, i.e. a blob object is associated with some
  41particular version of some file. 
  42
  43A "tree" object is an object that ties one or more "blob" objects into a
  44directory structure. In addition, a tree object can refer to other tree
  45objects, thus creating a directory hierarchy. 
  46
  47A "commit" object ties such directory hierarchies together into
  48a DAG of revisions - each "commit" is associated with exactly one tree
  49(the directory hierarchy at the time of the commit). In addition, a
  50"commit" refers to one or more "parent" commit objects that describe the
  51history of how we arrived at that directory hierarchy.
  52
  53As a special case, a commit object with no parents is called the "root"
  54object, and is the point of an initial project commit.  Each project
  55must have at least one root, and while you can tie several different
  56root objects together into one project by creating a commit object which
  57has two or more separate roots as its ultimate parents, that's probably
  58just going to confuse people.  So aim for the notion of "one root object
  59per project", even if git itself does not enforce that. 
  60
  61A "tag" object symbolically identifies and can be used to sign other
  62objects. It contains the identifier and type of another object, a
  63symbolic name (of course!) and, optionally, a signature.
  64
  65A "delta" object is used internally by the object database to minimise
  66disk usage. Instead of storing the entire contents of a revision, git
  67can behave in a similar manner to RCS et al and simply store a delta.
  68
  69Regardless of object type, all objects share the following
  70characteristics: they are all deflated with zlib, and have a header
  71that not only specifies their tag, but also provides size information
  72about the data in the object.  It's worth noting that the SHA1 hash
  73that is used to name the object is the hash of the original data or
  74the delta. (Historical note: in the dawn of the age of git the hash
  75was the sha1 of the _compressed_ object)
  76
  77As a result, the general consistency of an object can always be tested
  78independently of the contents or the type of the object: all objects can
  79be validated by verifying that (a) their hashes match the content of the
  80file and (b) the object successfully inflates to a stream of bytes that
  81forms a sequence of <ascii tag without space> + <space> + <ascii decimal
  82size> + <byte\0> + <binary object data>. 
  83
  84The structured objects can further have their structure and
  85connectivity to other objects verified. This is generally done with
  86the "git-fsck-cache" program, which generates a full dependency graph
  87of all objects, and verifies their internal consistency (in addition
  88to just verifying their superficial consistency through the hash).
  89
  90The object types in some more detail:
  91
  92Blob Object
  93~~~~~~~~~~~
  94A "blob" object is nothing but a binary blob of data, and doesn't
  95refer to anything else.  There is no signature or any other
  96verification of the data, so while the object is consistent (it _is_
  97indexed by its sha1 hash, so the data itself is certainly correct), it
  98has absolutely no other attributes.  No name associations, no
  99permissions.  It is purely a blob of data (i.e. normally "file
 100contents").
 101
 102In particular, since the blob is entirely defined by its data, if two
 103files in a directory tree (or in multiple different versions of the
 104repository) have the same contents, they will share the same blob
 105object. The object is totally independent of it's location in the
 106directory tree, and renaming a file does not change the object that
 107file is associated with in any way.
 108
 109A blob is created with link:git-write-blob.html[git-write-blob] and
 110it's data can be accessed by link:git-cat-file.html[git-cat-file]
 111
 112Tree Object
 113~~~~~~~~~~~
 114The next hierarchical object type is the "tree" object.  A tree object
 115is a list of mode/name/blob data, sorted by name.  Alternatively, the
 116mode data may specify a directory mode, in which case instead of
 117naming a blob, that name is associated with another TREE object.
 118
 119Like the "blob" object, a tree object is uniquely determined by the
 120set contents, and so two separate but identical trees will always
 121share the exact same object. This is true at all levels, i.e. it's
 122true for a "leaf" tree (which does not refer to any other trees, only
 123blobs) as well as for a whole subdirectory.
 124
 125For that reason a "tree" object is just a pure data abstraction: it
 126has no history, no signatures, no verification of validity, except
 127that since the contents are again protected by the hash itself, we can
 128trust that the tree is immutable and its contents never change.
 129
 130So you can trust the contents of a tree to be valid, the same way you
 131can trust the contents of a blob, but you don't know where those
 132contents _came_ from.
 133
 134Side note on trees: since a "tree" object is a sorted list of
 135"filename+content", you can create a diff between two trees without
 136actually having to unpack two trees.  Just ignore all common parts,
 137and your diff will look right.  In other words, you can effectively
 138(and efficiently) tell the difference between any two random trees by
 139O(n) where "n" is the size of the difference, rather than the size of
 140the tree.
 141
 142Side note 2 on trees: since the name of a "blob" depends entirely and
 143exclusively on its contents (i.e. there are no names or permissions
 144involved), you can see trivial renames or permission changes by
 145noticing that the blob stayed the same.  However, renames with data
 146changes need a smarter "diff" implementation.
 147
 148A tree is created with link:git-write-tree.html[git-write-tree] and
 149it's data can be accessed by link:git-ls-tree.html[git-ls-tree]
 150
 151Commit Object
 152~~~~~~~~~~~~~
 153The "commit" object is an object that introduces the notion of
 154history into the picture.  In contrast to the other objects, it
 155doesn't just describe the physical state of a tree, it describes how
 156we got there, and why.
 157
 158A "commit" is defined by the tree-object that it results in, the
 159parent commits (zero, one or more) that led up to that point, and a
 160comment on what happened.  Again, a commit is not trusted per se:
 161the contents are well-defined and "safe" due to the cryptographically
 162strong signatures at all levels, but there is no reason to believe
 163that the tree is "good" or that the merge information makes sense.
 164The parents do not have to actually have any relationship with the
 165result, for example.
 166
 167Note on commits: unlike real SCM's, commits do not contain
 168rename information or file mode chane information.  All of that is
 169implicit in the trees involved (the result tree, and the result trees
 170of the parents), and describing that makes no sense in this idiotic
 171file manager.
 172
 173A commit is created with link:git-commit-tree.html[git-commit-tree] and
 174it's data can be accessed by link:git-cat-file.html[git-cat-file]
 175
 176Trust
 177~~~~~
 178An aside on the notion of "trust". Trust is really outside the scope
 179of "git", but it's worth noting a few things.  First off, since
 180everything is hashed with SHA1, you _can_ trust that an object is
 181intact and has not been messed with by external sources.  So the name
 182of an object uniquely identifies a known state - just not a state that
 183you may want to trust.
 184
 185Furthermore, since the SHA1 signature of a commit refers to the
 186SHA1 signatures of the tree it is associated with and the signatures
 187of the parent, a single named commit specifies uniquely a whole set
 188of history, with full contents.  You can't later fake any step of the
 189way once you have the name of a commit.
 190
 191So to introduce some real trust in the system, the only thing you need
 192to do is to digitally sign just _one_ special note, which includes the
 193name of a top-level commit.  Your digital signature shows others
 194that you trust that commit, and the immutability of the history of
 195commits tells others that they can trust the whole history.
 196
 197In other words, you can easily validate a whole archive by just
 198sending out a single email that tells the people the name (SHA1 hash)
 199of the top commit, and digitally sign that email using something
 200like GPG/PGP.
 201
 202To assist in this, git also provides the tag object...
 203
 204Tag Object
 205~~~~~~~~~~
 206Git provides the "tag" object to simplify creating, managing and
 207exchanging symbolic and signed tokens.  The "tag" object at its
 208simplest simply symbolically identifies another object by containing
 209the sha1, type and symbolic name.
 210
 211However it can optionally contain additional signature information
 212(which git doesn't care about as long as there's less than 8k of
 213it). This can then be verified externally to git.
 214
 215Note that despite the tag features, "git" itself only handles content
 216integrity; the trust framework (and signature provision and
 217verification) has to come from outside.
 218
 219A tag is created with link:git-mktag.html[git-mktag] and
 220it's data can be accessed by link:git-cat-file.html[git-cat-file]
 221
 222Delta Object
 223~~~~~~~~~~~~
 224
 225The "delta" object is used internally by the object database to
 226minimise storage usage by using xdeltas (byte level diffs). Deltas can
 227form chains of arbitrary length as RCS does (although this is
 228configureable at creation time). Most operations won't see or even be
 229aware of delta objects as they are automatically 'applied' and appear
 230as 'real' git objects In other words, if you write your own routines
 231to look at the contents of the object database then you need to know
 232about this - otherwise you don't. Actually, that's not quite true -
 233one important area where deltas are likely to prove very valuable is
 234in reducing bandwidth loads - so the more sophisticated network tools
 235for git repositories will be aware of them too.
 236
 237Finally, git repositories can (and must) be deltafied in the
 238background - the work to calculate the differences does not take place
 239automatically at commit time.
 240
 241A delta can be created (or undeltafied) with
 242link:git-mkdelta.html[git-mkdelta] it's raw data cannot be accessed at
 243present.
 244
 245
 246The "index" aka "Current Directory Cache"
 247-----------------------------------------
 248The index is a simple binary file, which contains an efficient
 249representation of a virtual directory content at some random time.  It
 250does so by a simple array that associates a set of names, dates,
 251permissions and content (aka "blob") objects together.  The cache is
 252always kept ordered by name, and names are unique (with a few very
 253specific rules) at any point in time, but the cache has no long-term
 254meaning, and can be partially updated at any time.
 255
 256In particular, the index certainly does not need to be consistent with
 257the current directory contents (in fact, most operations will depend on
 258different ways to make the index _not_ be consistent with the directory
 259hierarchy), but it has three very important attributes:
 260
 261'(a) it can re-generate the full state it caches (not just the
 262directory structure: it contains pointers to the "blob" objects so
 263that it can regenerate the data too)'
 264
 265As a special case, there is a clear and unambiguous one-way mapping
 266from a current directory cache to a "tree object", which can be
 267efficiently created from just the current directory cache without
 268actually looking at any other data.  So a directory cache at any one
 269time uniquely specifies one and only one "tree" object (but has
 270additional data to make it easy to match up that tree object with what
 271has happened in the directory)
 272
 273'(b) it has efficient methods for finding inconsistencies between that
 274cached state ("tree object waiting to be instantiated") and the
 275current state.'
 276
 277'(c) it can additionally efficiently represent information about merge
 278conflicts between different tree objects, allowing each pathname to be
 279associated with sufficient information about the trees involved that
 280you can create a three-way merge between them.'
 281
 282Those are the three ONLY things that the directory cache does.  It's a
 283cache, and the normal operation is to re-generate it completely from a
 284known tree object, or update/compare it with a live tree that is being
 285developed.  If you blow the directory cache away entirely, you generally
 286haven't lost any information as long as you have the name of the tree
 287that it described. 
 288
 289At the same time, the directory index is at the same time also the
 290staging area for creating new trees, and creating a new tree always
 291involves a controlled modification of the index file.  In particular,
 292the index file can have the representation of an intermediate tree that
 293has not yet been instantiated.  So the index can be thought of as a
 294write-back cache, which can contain dirty information that has not yet
 295been written back to the backing store.
 296
 297
 298
 299The Workflow
 300------------
 301Generally, all "git" operations work on the index file. Some operations
 302work *purely* on the index file (showing the current state of the
 303index), but most operations move data to and from the index file. Either
 304from the database or from the working directory. Thus there are four
 305main combinations: 
 306
 3071) working directory -> index
 308~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 309
 310You update the index with information from the working directory with
 311the link:git-update-cache.html[git-update-cache] command.  You
 312generally update the index information by just specifying the filename
 313you want to update, like so:
 314
 315        git-update-cache filename
 316
 317but to avoid common mistakes with filename globbing etc, the command
 318will not normally add totally new entries or remove old entries,
 319i.e. it will normally just update existing cache entries.
 320
 321To tell git that yes, you really do realize that certain files no
 322longer exist in the archive, or that new files should be added, you
 323should use the "--remove" and "--add" flags respectively.
 324
 325NOTE! A "--remove" flag does _not_ mean that subsequent filenames will
 326necessarily be removed: if the files still exist in your directory
 327structure, the index will be updated with their new status, not
 328removed. The only thing "--remove" means is that update-cache will be
 329considering a removed file to be a valid thing, and if the file really
 330does not exist any more, it will update the index accordingly.
 331
 332As a special case, you can also do "git-update-cache --refresh", which
 333will refresh the "stat" information of each index to match the current
 334stat information. It will _not_ update the object status itself, and
 335it will only update the fields that are used to quickly test whether
 336an object still matches its old backing store object.
 337
 3382) index -> object database
 339~~~~~~~~~~~~~~~~~~~~~~~~~~~
 340
 341You write your current index file to a "tree" object with the program
 342
 343        git-write-tree
 344
 345that doesn't come with any options - it will just write out the
 346current index into the set of tree objects that describe that state,
 347and it will return the name of the resulting top-level tree. You can
 348use that tree to re-generate the index at any time by going in the
 349other direction:
 350
 3513) object database -> index
 352~~~~~~~~~~~~~~~~~~~~~~~~~~~
 353
 354You read a "tree" file from the object database, and use that to
 355populate (and overwrite - don't do this if your index contains any
 356unsaved state that you might want to restore later!) your current
 357index.  Normal operation is just
 358
 359                git-read-tree <sha1 of tree>
 360
 361and your index file will now be equivalent to the tree that you saved
 362earlier. However, that is only your _index_ file: your working
 363directory contents have not been modified.
 364
 3654) index -> working directory
 366~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 367
 368You update your working directory from the index by "checking out"
 369files. This is not a very common operation, since normally you'd just
 370keep your files updated, and rather than write to your working
 371directory, you'd tell the index files about the changes in your
 372working directory (i.e. "git-update-cache").
 373
 374However, if you decide to jump to a new version, or check out somebody
 375else's version, or just restore a previous tree, you'd populate your
 376index file with read-tree, and then you need to check out the result
 377with
 378                git-checkout-cache filename
 379
 380or, if you want to check out all of the index, use "-a".
 381
 382NOTE! git-checkout-cache normally refuses to overwrite old files, so
 383if you have an old version of the tree already checked out, you will
 384need to use the "-f" flag (_before_ the "-a" flag or the filename) to
 385_force_ the checkout.
 386
 387
 388Finally, there are a few odds and ends which are not purely moving
 389from one representation to the other:
 390
 3915) Tying it all together
 392~~~~~~~~~~~~~~~~~~~~~~~~
 393To commit a tree you have instantiated with "git-write-tree", you'd
 394create a "commit" object that refers to that tree and the history
 395behind it - most notably the "parent" commits that preceded it in
 396history.
 397
 398Normally a "commit" has one parent: the previous state of the tree
 399before a certain change was made. However, sometimes it can have two
 400or more parent commits, in which case we call it a "merge", due to the
 401fact that such a commit brings together ("merges") two or more
 402previous states represented by other commits.
 403
 404In other words, while a "tree" represents a particular directory state
 405of a working directory, a "commit" represents that state in "time",
 406and explains how we got there.
 407
 408You create a commit object by giving it the tree that describes the
 409state at the time of the commit, and a list of parents:
 410
 411        git-commit-tree <tree> -p <parent> [-p <parent2> ..]
 412
 413and then giving the reason for the commit on stdin (either through
 414redirection from a pipe or file, or by just typing it at the tty).
 415
 416git-commit-tree will return the name of the object that represents
 417that commit, and you should save it away for later use. Normally,
 418you'd commit a new "HEAD" state, and while git doesn't care where you
 419save the note about that state, in practice we tend to just write the
 420result to the file ".git/HEAD", so that we can always see what the
 421last committed state was.
 422
 4236) Examining the data
 424~~~~~~~~~~~~~~~~~~~~~
 425
 426You can examine the data represented in the object database and the
 427index with various helper tools. For every object, you can use
 428link:git-cat-file.html[git-cat-file] to examine details about the
 429object:
 430
 431                git-cat-file -t <objectname>
 432
 433shows the type of the object, and once you have the type (which is
 434usually implicit in where you find the object), you can use
 435
 436                git-cat-file blob|tree|commit <objectname>
 437
 438to show its contents. NOTE! Trees have binary content, and as a result
 439there is a special helper for showing that content, called
 440"git-ls-tree", which turns the binary content into a more easily
 441readable form.
 442
 443It's especially instructive to look at "commit" objects, since those
 444tend to be small and fairly self-explanatory. In particular, if you
 445follow the convention of having the top commit name in ".git/HEAD",
 446you can do
 447
 448                git-cat-file commit $(cat .git/HEAD)
 449
 450to see what the top commit was.
 451
 4527) Merging multiple trees
 453~~~~~~~~~~~~~~~~~~~~~~~~~
 454
 455Git helps you do a three-way merge, which you can expand to n-way by
 456repeating the merge procedure arbitrary times until you finally
 457"commit" the state.  The normal situation is that you'd only do one
 458three-way merge (two parents), and commit it, but if you like to, you
 459can do multiple parents in one go.
 460
 461To do a three-way merge, you need the two sets of "commit" objects
 462that you want to merge, use those to find the closest common parent (a
 463third "commit" object), and then use those commit objects to find the
 464state of the directory ("tree" object) at these points.
 465
 466To get the "base" for the merge, you first look up the common parent
 467of two commits with
 468
 469                git-merge-base <commit1> <commit2>
 470
 471which will return you the commit they are both based on.  You should
 472now look up the "tree" objects of those commits, which you can easily
 473do with (for example)
 474
 475                git-cat-file commit <commitname> | head -1
 476
 477since the tree object information is always the first line in a commit
 478object.
 479
 480Once you know the three trees you are going to merge (the one
 481"original" tree, aka the common case, and the two "result" trees, aka
 482the branches you want to merge), you do a "merge" read into the
 483index. This will throw away your old index contents, so you should
 484make sure that you've committed those - in fact you would normally
 485always do a merge against your last commit (which should thus match
 486what you have in your current index anyway).
 487
 488To do the merge, do
 489
 490                git-read-tree -m <origtree> <target1tree> <target2tree>
 491
 492which will do all trivial merge operations for you directly in the
 493index file, and you can just write the result out with
 494"git-write-tree".
 495
 496NOTE! Because the merge is done in the index file, and not in your
 497working directory, your working directory will no longer match your
 498index. You can use "git-checkout-cache -f -a" to make the effect of
 499the merge be seen in your working directory.
 500
 501NOTE2! Sadly, many merges aren't trivial. If there are files that have
 502been added.moved or removed, or if both branches have modified the
 503same file, you will be left with an index tree that contains "merge
 504entries" in it. Such an index tree can _NOT_ be written out to a tree
 505object, and you will have to resolve any such merge clashes using
 506other tools before you can write out the result.
 507
 508
 509[ fixme: talk about resolving merges here ]